Characterization of the complete plastid genome of Chinese medicinal plant Isodon serra (Lamiaceae)

The herb Isodon serra (Maximowicz) Kudô, which is widely distributed in China and its neighbor regions, is a well-known traditional Chinese medicinal plant. In this study, we characterized the complete plastid genome sequence of I. serra using Illumina sequencing data. The plastome is 152,676 bp in...

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Autores principales: Zhang, Hui-Ye, Ma, Wen-Zhe, Yan, Hai-Fei, Wang, De-Qin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510653/
https://www.ncbi.nlm.nih.gov/pubmed/33366937
http://dx.doi.org/10.1080/23802359.2020.1765429
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author Zhang, Hui-Ye
Ma, Wen-Zhe
Yan, Hai-Fei
Wang, De-Qin
author_facet Zhang, Hui-Ye
Ma, Wen-Zhe
Yan, Hai-Fei
Wang, De-Qin
author_sort Zhang, Hui-Ye
collection PubMed
description The herb Isodon serra (Maximowicz) Kudô, which is widely distributed in China and its neighbor regions, is a well-known traditional Chinese medicinal plant. In this study, we characterized the complete plastid genome sequence of I. serra using Illumina sequencing data. The plastome is 152,676 bp in length and contains a typical quadripartite structure. The inverted repeat (IR), large-single copy (LSC) and small-single copy (SSC) regions each has 25,716 bp, 83,564 bp, and 17,680 bp. The genome contains 80 protein coding genes (PCGs), 30 transfer RNAs (tRNA), and four ribosomal RNAs (rRNA). The phylogenetic result indicates I. serra together with genera Ocimum and Lavandula formed tribe Ocimeae clade.
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spelling pubmed-75106532020-12-22 Characterization of the complete plastid genome of Chinese medicinal plant Isodon serra (Lamiaceae) Zhang, Hui-Ye Ma, Wen-Zhe Yan, Hai-Fei Wang, De-Qin Mitochondrial DNA B Resour Mitogenome Announcement The herb Isodon serra (Maximowicz) Kudô, which is widely distributed in China and its neighbor regions, is a well-known traditional Chinese medicinal plant. In this study, we characterized the complete plastid genome sequence of I. serra using Illumina sequencing data. The plastome is 152,676 bp in length and contains a typical quadripartite structure. The inverted repeat (IR), large-single copy (LSC) and small-single copy (SSC) regions each has 25,716 bp, 83,564 bp, and 17,680 bp. The genome contains 80 protein coding genes (PCGs), 30 transfer RNAs (tRNA), and four ribosomal RNAs (rRNA). The phylogenetic result indicates I. serra together with genera Ocimum and Lavandula formed tribe Ocimeae clade. Taylor & Francis 2020-05-18 /pmc/articles/PMC7510653/ /pubmed/33366937 http://dx.doi.org/10.1080/23802359.2020.1765429 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Hui-Ye
Ma, Wen-Zhe
Yan, Hai-Fei
Wang, De-Qin
Characterization of the complete plastid genome of Chinese medicinal plant Isodon serra (Lamiaceae)
title Characterization of the complete plastid genome of Chinese medicinal plant Isodon serra (Lamiaceae)
title_full Characterization of the complete plastid genome of Chinese medicinal plant Isodon serra (Lamiaceae)
title_fullStr Characterization of the complete plastid genome of Chinese medicinal plant Isodon serra (Lamiaceae)
title_full_unstemmed Characterization of the complete plastid genome of Chinese medicinal plant Isodon serra (Lamiaceae)
title_short Characterization of the complete plastid genome of Chinese medicinal plant Isodon serra (Lamiaceae)
title_sort characterization of the complete plastid genome of chinese medicinal plant isodon serra (lamiaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510653/
https://www.ncbi.nlm.nih.gov/pubmed/33366937
http://dx.doi.org/10.1080/23802359.2020.1765429
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