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The complete chloroplast genome of Tanacetum coccineum
Tanacetum coccineum, a perennial plant of the Tanacetum genus, cultivated as a natural pesticide or ornamental plant widely distributed in many countries. In this research, the complete chloroplast genome sequence of T. coccineum was determined to comprise a 150,143 bp double-stranded circular DNA,...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510654/ https://www.ncbi.nlm.nih.gov/pubmed/33366986 http://dx.doi.org/10.1080/23802359.2020.1768915 |
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author | Zeng, Tuo Li, Jiawen Wang, Caiyun He, Jiefang |
author_facet | Zeng, Tuo Li, Jiawen Wang, Caiyun He, Jiefang |
author_sort | Zeng, Tuo |
collection | PubMed |
description | Tanacetum coccineum, a perennial plant of the Tanacetum genus, cultivated as a natural pesticide or ornamental plant widely distributed in many countries. In this research, the complete chloroplast genome sequence of T. coccineum was determined to comprise a 150,143 bp double-stranded circular DNA, including a pair of 24,416 bp inverted repeat regions (IRs), small single copy (SSC) region of 18,389 bp and large single copy (LCS) region of 82,922 bp. An overall GC content was 37.49%, and the corresponding values in IRs, SSC, and LSC regions are 43.16%, 30.88%, and 35.61%, respectively. A total of 129 genes include 84 protein-coding genes, 37 tRNA, and eight rRNA. Four rRNA genes and seven tRNA genes were duplicated in IRs. A phylogenetic tree reconstructed by 38 Composite family chloroplast genomes sequence reveals that T. coccineum is mostly related to Ismelia carinata. |
format | Online Article Text |
id | pubmed-7510654 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-75106542020-12-22 The complete chloroplast genome of Tanacetum coccineum Zeng, Tuo Li, Jiawen Wang, Caiyun He, Jiefang Mitochondrial DNA B Resour Mitogenome Announcement Tanacetum coccineum, a perennial plant of the Tanacetum genus, cultivated as a natural pesticide or ornamental plant widely distributed in many countries. In this research, the complete chloroplast genome sequence of T. coccineum was determined to comprise a 150,143 bp double-stranded circular DNA, including a pair of 24,416 bp inverted repeat regions (IRs), small single copy (SSC) region of 18,389 bp and large single copy (LCS) region of 82,922 bp. An overall GC content was 37.49%, and the corresponding values in IRs, SSC, and LSC regions are 43.16%, 30.88%, and 35.61%, respectively. A total of 129 genes include 84 protein-coding genes, 37 tRNA, and eight rRNA. Four rRNA genes and seven tRNA genes were duplicated in IRs. A phylogenetic tree reconstructed by 38 Composite family chloroplast genomes sequence reveals that T. coccineum is mostly related to Ismelia carinata. Taylor & Francis 2020-06-01 /pmc/articles/PMC7510654/ /pubmed/33366986 http://dx.doi.org/10.1080/23802359.2020.1768915 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zeng, Tuo Li, Jiawen Wang, Caiyun He, Jiefang The complete chloroplast genome of Tanacetum coccineum |
title | The complete chloroplast genome of Tanacetum coccineum |
title_full | The complete chloroplast genome of Tanacetum coccineum |
title_fullStr | The complete chloroplast genome of Tanacetum coccineum |
title_full_unstemmed | The complete chloroplast genome of Tanacetum coccineum |
title_short | The complete chloroplast genome of Tanacetum coccineum |
title_sort | complete chloroplast genome of tanacetum coccineum |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510654/ https://www.ncbi.nlm.nih.gov/pubmed/33366986 http://dx.doi.org/10.1080/23802359.2020.1768915 |
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