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Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea
The first complete chloroplast genome sequences of Korean endemic pokeweed in Ulleung Island, Phytolacca insularis, were reported in this study. The P. insularis plastome was 156,419 bp long, with the large single copy (LSC) region of 86,106 bp, the small single copy (SSC) region of 18,335 bp, and t...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510664/ https://www.ncbi.nlm.nih.gov/pubmed/33365397 http://dx.doi.org/10.1080/23802359.2018.1535841 |
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author | Yang, Ji Young Lee, Woong Pak, Jae-Hong Kim, Seung-Chul |
author_facet | Yang, Ji Young Lee, Woong Pak, Jae-Hong Kim, Seung-Chul |
author_sort | Yang, Ji Young |
collection | PubMed |
description | The first complete chloroplast genome sequences of Korean endemic pokeweed in Ulleung Island, Phytolacca insularis, were reported in this study. The P. insularis plastome was 156,419 bp long, with the large single copy (LSC) region of 86,106 bp, the small single copy (SSC) region of 18,335 bp, and two inverted repeat (IR) regions of 25,989 bp. The plastome contained 132 genes, including 84 protein-coding, eight ribosomal RNA, and 39 transfer RNA genes. The overall GC content was 36.8%. Phylogenetic analysis of 13 representative plastomes within the order Caryophyllales suggests that P. insularis is closely related to the species in family Aizoaceae. |
format | Online Article Text |
id | pubmed-7510664 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-75106642020-12-22 Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea Yang, Ji Young Lee, Woong Pak, Jae-Hong Kim, Seung-Chul Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome sequences of Korean endemic pokeweed in Ulleung Island, Phytolacca insularis, were reported in this study. The P. insularis plastome was 156,419 bp long, with the large single copy (LSC) region of 86,106 bp, the small single copy (SSC) region of 18,335 bp, and two inverted repeat (IR) regions of 25,989 bp. The plastome contained 132 genes, including 84 protein-coding, eight ribosomal RNA, and 39 transfer RNA genes. The overall GC content was 36.8%. Phylogenetic analysis of 13 representative plastomes within the order Caryophyllales suggests that P. insularis is closely related to the species in family Aizoaceae. Taylor & Francis 2018-11-21 /pmc/articles/PMC7510664/ /pubmed/33365397 http://dx.doi.org/10.1080/23802359.2018.1535841 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Yang, Ji Young Lee, Woong Pak, Jae-Hong Kim, Seung-Chul Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea |
title | Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea |
title_full | Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea |
title_fullStr | Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea |
title_full_unstemmed | Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea |
title_short | Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea |
title_sort | complete chloroplast genome of ulleung island endemic pokeweed, phytolacca insularis (phytolaccaceae), in korea |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510664/ https://www.ncbi.nlm.nih.gov/pubmed/33365397 http://dx.doi.org/10.1080/23802359.2018.1535841 |
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