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Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea

The first complete chloroplast genome sequences of Korean endemic pokeweed in Ulleung Island, Phytolacca insularis, were reported in this study. The P. insularis plastome was 156,419 bp long, with the large single copy (LSC) region of 86,106 bp, the small single copy (SSC) region of 18,335 bp, and t...

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Autores principales: Yang, Ji Young, Lee, Woong, Pak, Jae-Hong, Kim, Seung-Chul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510664/
https://www.ncbi.nlm.nih.gov/pubmed/33365397
http://dx.doi.org/10.1080/23802359.2018.1535841
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author Yang, Ji Young
Lee, Woong
Pak, Jae-Hong
Kim, Seung-Chul
author_facet Yang, Ji Young
Lee, Woong
Pak, Jae-Hong
Kim, Seung-Chul
author_sort Yang, Ji Young
collection PubMed
description The first complete chloroplast genome sequences of Korean endemic pokeweed in Ulleung Island, Phytolacca insularis, were reported in this study. The P. insularis plastome was 156,419 bp long, with the large single copy (LSC) region of 86,106 bp, the small single copy (SSC) region of 18,335 bp, and two inverted repeat (IR) regions of 25,989 bp. The plastome contained 132 genes, including 84 protein-coding, eight ribosomal RNA, and 39 transfer RNA genes. The overall GC content was 36.8%. Phylogenetic analysis of 13 representative plastomes within the order Caryophyllales suggests that P. insularis is closely related to the species in family Aizoaceae.
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spelling pubmed-75106642020-12-22 Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea Yang, Ji Young Lee, Woong Pak, Jae-Hong Kim, Seung-Chul Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome sequences of Korean endemic pokeweed in Ulleung Island, Phytolacca insularis, were reported in this study. The P. insularis plastome was 156,419 bp long, with the large single copy (LSC) region of 86,106 bp, the small single copy (SSC) region of 18,335 bp, and two inverted repeat (IR) regions of 25,989 bp. The plastome contained 132 genes, including 84 protein-coding, eight ribosomal RNA, and 39 transfer RNA genes. The overall GC content was 36.8%. Phylogenetic analysis of 13 representative plastomes within the order Caryophyllales suggests that P. insularis is closely related to the species in family Aizoaceae. Taylor & Francis 2018-11-21 /pmc/articles/PMC7510664/ /pubmed/33365397 http://dx.doi.org/10.1080/23802359.2018.1535841 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yang, Ji Young
Lee, Woong
Pak, Jae-Hong
Kim, Seung-Chul
Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea
title Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea
title_full Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea
title_fullStr Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea
title_full_unstemmed Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea
title_short Complete chloroplast genome of Ulleung Island endemic pokeweed, Phytolacca insularis (Phytolaccaceae), in Korea
title_sort complete chloroplast genome of ulleung island endemic pokeweed, phytolacca insularis (phytolaccaceae), in korea
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510664/
https://www.ncbi.nlm.nih.gov/pubmed/33365397
http://dx.doi.org/10.1080/23802359.2018.1535841
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