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DNA barcoding in quarantine inspection: a case study on quarantine insect monitoring for Lepidoptera obtained through quarantine inspection on foreign vessels

We conducted quarantine insect species diversity monitoring using DNA barcoding with 517 lepidopteran samples that were obtained from quarantine inspections of foreign vessels entering Korea. For species delimitation and species identification of the analyzed samples, we applied a 2% cutoff rule. Co...

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Detalles Bibliográficos
Autores principales: Kang, Tae Hwa, Kim, Sunam, Hong, Ki-Jeong, Lee, Heung Sik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510668/
https://www.ncbi.nlm.nih.gov/pubmed/33365413
http://dx.doi.org/10.1080/23802359.2018.1536447
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author Kang, Tae Hwa
Kim, Sunam
Hong, Ki-Jeong
Lee, Heung Sik
author_facet Kang, Tae Hwa
Kim, Sunam
Hong, Ki-Jeong
Lee, Heung Sik
author_sort Kang, Tae Hwa
collection PubMed
description We conducted quarantine insect species diversity monitoring using DNA barcoding with 517 lepidopteran samples that were obtained from quarantine inspections of foreign vessels entering Korea. For species delimitation and species identification of the analyzed samples, we applied a 2% cutoff rule. Consequently, 145 (368 samples) were considered taxonomically identified. Therefore the number of samples that were identified to the species level was relatively low, at approximately 71%. Thirty of 145 species were not known in Korea, three, i.e., Noctua pronuba (Noctuidae), Orthosia hibisci (Noctuidae), and Pieris brassicae (Pieridae), were checked as ‘Regulated pests’ in Korea.
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spelling pubmed-75106682020-12-22 DNA barcoding in quarantine inspection: a case study on quarantine insect monitoring for Lepidoptera obtained through quarantine inspection on foreign vessels Kang, Tae Hwa Kim, Sunam Hong, Ki-Jeong Lee, Heung Sik Mitochondrial DNA B Resour Mito Communication We conducted quarantine insect species diversity monitoring using DNA barcoding with 517 lepidopteran samples that were obtained from quarantine inspections of foreign vessels entering Korea. For species delimitation and species identification of the analyzed samples, we applied a 2% cutoff rule. Consequently, 145 (368 samples) were considered taxonomically identified. Therefore the number of samples that were identified to the species level was relatively low, at approximately 71%. Thirty of 145 species were not known in Korea, three, i.e., Noctua pronuba (Noctuidae), Orthosia hibisci (Noctuidae), and Pieris brassicae (Pieridae), were checked as ‘Regulated pests’ in Korea. Taylor & Francis 2018-12-27 /pmc/articles/PMC7510668/ /pubmed/33365413 http://dx.doi.org/10.1080/23802359.2018.1536447 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mito Communication
Kang, Tae Hwa
Kim, Sunam
Hong, Ki-Jeong
Lee, Heung Sik
DNA barcoding in quarantine inspection: a case study on quarantine insect monitoring for Lepidoptera obtained through quarantine inspection on foreign vessels
title DNA barcoding in quarantine inspection: a case study on quarantine insect monitoring for Lepidoptera obtained through quarantine inspection on foreign vessels
title_full DNA barcoding in quarantine inspection: a case study on quarantine insect monitoring for Lepidoptera obtained through quarantine inspection on foreign vessels
title_fullStr DNA barcoding in quarantine inspection: a case study on quarantine insect monitoring for Lepidoptera obtained through quarantine inspection on foreign vessels
title_full_unstemmed DNA barcoding in quarantine inspection: a case study on quarantine insect monitoring for Lepidoptera obtained through quarantine inspection on foreign vessels
title_short DNA barcoding in quarantine inspection: a case study on quarantine insect monitoring for Lepidoptera obtained through quarantine inspection on foreign vessels
title_sort dna barcoding in quarantine inspection: a case study on quarantine insect monitoring for lepidoptera obtained through quarantine inspection on foreign vessels
topic Mito Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510668/
https://www.ncbi.nlm.nih.gov/pubmed/33365413
http://dx.doi.org/10.1080/23802359.2018.1536447
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