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The complete mitochondrial genome of red-clawed crab Chiromantes haematochir (Sesarmidae: Grapsidae)
The complete mitogenome of Chiromantes haematocheir is 15 899 bp in length contains the typical set of 37 genes, including 13 protein-coding genes (PCGs) (ATP6, ATP8, COI-III, ND1-6, ND4L, and Cyt b), two rRNAs (12S rRNA and 16S rRNA), 22 tRNAs, and a putative CR (D-loop). All PCGs start with an ATG...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510750/ https://www.ncbi.nlm.nih.gov/pubmed/33365416 http://dx.doi.org/10.1080/23802359.2018.1536452 |
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author | Li, Qingyue Xu, Caoling Wang, Chong Liu, Gang |
author_facet | Li, Qingyue Xu, Caoling Wang, Chong Liu, Gang |
author_sort | Li, Qingyue |
collection | PubMed |
description | The complete mitogenome of Chiromantes haematocheir is 15 899 bp in length contains the typical set of 37 genes, including 13 protein-coding genes (PCGs) (ATP6, ATP8, COI-III, ND1-6, ND4L, and Cyt b), two rRNAs (12S rRNA and 16S rRNA), 22 tRNAs, and a putative CR (D-loop). All PCGs start with an ATG codon except ND1 start with ATT and ND3 start with ATA. TAA is the most frequent stop codon, although COI end with TA-, and COII stop with the single nucleotide T-. The new mtDNA sequence contains 12S rRNA and 16S rRNA of rRNAs, separated with tRNA(val). All tRNAs possess the typical clover leaf secondary structure except for tRNA(Ser(AGN)) and tRNA(Leu(CUN)), which lacks a dihydroxyuridine (DHU) arm. The CR is 826 bp in length, located between 12S rRNA and tRNA(Glx). The phylogenetic trees support Chiromantes haematochir has close relative with Sesarmops sinensis and Sesarmane glectum. |
format | Online Article Text |
id | pubmed-7510750 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-75107502020-12-22 The complete mitochondrial genome of red-clawed crab Chiromantes haematochir (Sesarmidae: Grapsidae) Li, Qingyue Xu, Caoling Wang, Chong Liu, Gang Mitochondrial DNA B Resour Mitogenome Announcement The complete mitogenome of Chiromantes haematocheir is 15 899 bp in length contains the typical set of 37 genes, including 13 protein-coding genes (PCGs) (ATP6, ATP8, COI-III, ND1-6, ND4L, and Cyt b), two rRNAs (12S rRNA and 16S rRNA), 22 tRNAs, and a putative CR (D-loop). All PCGs start with an ATG codon except ND1 start with ATT and ND3 start with ATA. TAA is the most frequent stop codon, although COI end with TA-, and COII stop with the single nucleotide T-. The new mtDNA sequence contains 12S rRNA and 16S rRNA of rRNAs, separated with tRNA(val). All tRNAs possess the typical clover leaf secondary structure except for tRNA(Ser(AGN)) and tRNA(Leu(CUN)), which lacks a dihydroxyuridine (DHU) arm. The CR is 826 bp in length, located between 12S rRNA and tRNA(Glx). The phylogenetic trees support Chiromantes haematochir has close relative with Sesarmops sinensis and Sesarmane glectum. Taylor & Francis 2018-11-25 /pmc/articles/PMC7510750/ /pubmed/33365416 http://dx.doi.org/10.1080/23802359.2018.1536452 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Li, Qingyue Xu, Caoling Wang, Chong Liu, Gang The complete mitochondrial genome of red-clawed crab Chiromantes haematochir (Sesarmidae: Grapsidae) |
title | The complete mitochondrial genome of red-clawed crab Chiromantes haematochir (Sesarmidae: Grapsidae) |
title_full | The complete mitochondrial genome of red-clawed crab Chiromantes haematochir (Sesarmidae: Grapsidae) |
title_fullStr | The complete mitochondrial genome of red-clawed crab Chiromantes haematochir (Sesarmidae: Grapsidae) |
title_full_unstemmed | The complete mitochondrial genome of red-clawed crab Chiromantes haematochir (Sesarmidae: Grapsidae) |
title_short | The complete mitochondrial genome of red-clawed crab Chiromantes haematochir (Sesarmidae: Grapsidae) |
title_sort | complete mitochondrial genome of red-clawed crab chiromantes haematochir (sesarmidae: grapsidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510750/ https://www.ncbi.nlm.nih.gov/pubmed/33365416 http://dx.doi.org/10.1080/23802359.2018.1536452 |
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