The complete chloroplast genome sequence of Malus halliana (Rosaceae), an important ornamental plant

Malus halliana is an important ornamental plant resource. Herein, we determined the complete chloroplast (cp) genome sequence of M. halliana using Illumina sequencing data. The whole cp genome is 160,089 bp in size, consisting of a pair of inverted repeats (IR 52,706 bp), a large single-copy region...

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Autores principales: Wang, Shuai, Yang, Jing, Zhang, Bin, Shang, Fude, Wang, Hongwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510752/
https://www.ncbi.nlm.nih.gov/pubmed/33366951
http://dx.doi.org/10.1080/23802359.2020.1768936
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author Wang, Shuai
Yang, Jing
Zhang, Bin
Shang, Fude
Wang, Hongwei
author_facet Wang, Shuai
Yang, Jing
Zhang, Bin
Shang, Fude
Wang, Hongwei
author_sort Wang, Shuai
collection PubMed
description Malus halliana is an important ornamental plant resource. Herein, we determined the complete chloroplast (cp) genome sequence of M. halliana using Illumina sequencing data. The whole cp genome is 160,089 bp in size, consisting of a pair of inverted repeats (IR 52,706 bp), a large single-copy region (LSC 88,189 bp), and a small single-copy region (SSC 19,194 bp). The plastid genome contains 129 genes, 84 protein-coding genes, 37 tRNA genes, and eight rRNA genes. In addition, a maximum-likelihood phylogenetic analysis demonstrated that M. halliana was most closely related to Malus hupehensis. The complete plastome sequence will provide useful genetic information for phylogenetic studies, the resolution of taxonomic discrepancies, and molecular breeding.
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spelling pubmed-75107522020-12-22 The complete chloroplast genome sequence of Malus halliana (Rosaceae), an important ornamental plant Wang, Shuai Yang, Jing Zhang, Bin Shang, Fude Wang, Hongwei Mitochondrial DNA B Resour Mitogenome Announcement Malus halliana is an important ornamental plant resource. Herein, we determined the complete chloroplast (cp) genome sequence of M. halliana using Illumina sequencing data. The whole cp genome is 160,089 bp in size, consisting of a pair of inverted repeats (IR 52,706 bp), a large single-copy region (LSC 88,189 bp), and a small single-copy region (SSC 19,194 bp). The plastid genome contains 129 genes, 84 protein-coding genes, 37 tRNA genes, and eight rRNA genes. In addition, a maximum-likelihood phylogenetic analysis demonstrated that M. halliana was most closely related to Malus hupehensis. The complete plastome sequence will provide useful genetic information for phylogenetic studies, the resolution of taxonomic discrepancies, and molecular breeding. Taylor & Francis 2020-05-27 /pmc/articles/PMC7510752/ /pubmed/33366951 http://dx.doi.org/10.1080/23802359.2020.1768936 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wang, Shuai
Yang, Jing
Zhang, Bin
Shang, Fude
Wang, Hongwei
The complete chloroplast genome sequence of Malus halliana (Rosaceae), an important ornamental plant
title The complete chloroplast genome sequence of Malus halliana (Rosaceae), an important ornamental plant
title_full The complete chloroplast genome sequence of Malus halliana (Rosaceae), an important ornamental plant
title_fullStr The complete chloroplast genome sequence of Malus halliana (Rosaceae), an important ornamental plant
title_full_unstemmed The complete chloroplast genome sequence of Malus halliana (Rosaceae), an important ornamental plant
title_short The complete chloroplast genome sequence of Malus halliana (Rosaceae), an important ornamental plant
title_sort complete chloroplast genome sequence of malus halliana (rosaceae), an important ornamental plant
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510752/
https://www.ncbi.nlm.nih.gov/pubmed/33366951
http://dx.doi.org/10.1080/23802359.2020.1768936
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