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Characterization of the complete chloroplast genome sequence of Pistia stratiotes (Araceae) and its phylogenetic implications

Pistia stratiotes is an invasive aquatic weed in South China. In this study, the first complete chloroplast (cp) genome of P. stratiotes was reported and phylogenetic analysis was conducted with Araceae species based on the cp genome sequences. The genome is a circular molecule of 164,551 bp in leng...

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Autores principales: Quan, Guoming, Chen, Lushu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510755/
https://www.ncbi.nlm.nih.gov/pubmed/33366955
http://dx.doi.org/10.1080/23802359.2020.1768935
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author Quan, Guoming
Chen, Lushu
author_facet Quan, Guoming
Chen, Lushu
author_sort Quan, Guoming
collection PubMed
description Pistia stratiotes is an invasive aquatic weed in South China. In this study, the first complete chloroplast (cp) genome of P. stratiotes was reported and phylogenetic analysis was conducted with Araceae species based on the cp genome sequences. The genome is a circular molecule of 164,551 bp in length with 36.00% average GC content and includes a large single-copy region (90,705 bp), a small single-copy region (21,886 bp), and two inverted repeat regions (25,980 bp). It contains a total of 129 genes, including 84 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The maximum likelihood tree indicated that P. stratiotes is related to the genus of Alocasia. The cp genome will provide useful molecular data for further phylogenetic and evolutionary analysis of P. stratiotes.
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spelling pubmed-75107552020-12-22 Characterization of the complete chloroplast genome sequence of Pistia stratiotes (Araceae) and its phylogenetic implications Quan, Guoming Chen, Lushu Mitochondrial DNA B Resour Mitogenome Announcement Pistia stratiotes is an invasive aquatic weed in South China. In this study, the first complete chloroplast (cp) genome of P. stratiotes was reported and phylogenetic analysis was conducted with Araceae species based on the cp genome sequences. The genome is a circular molecule of 164,551 bp in length with 36.00% average GC content and includes a large single-copy region (90,705 bp), a small single-copy region (21,886 bp), and two inverted repeat regions (25,980 bp). It contains a total of 129 genes, including 84 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The maximum likelihood tree indicated that P. stratiotes is related to the genus of Alocasia. The cp genome will provide useful molecular data for further phylogenetic and evolutionary analysis of P. stratiotes. Taylor & Francis 2020-05-27 /pmc/articles/PMC7510755/ /pubmed/33366955 http://dx.doi.org/10.1080/23802359.2020.1768935 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Quan, Guoming
Chen, Lushu
Characterization of the complete chloroplast genome sequence of Pistia stratiotes (Araceae) and its phylogenetic implications
title Characterization of the complete chloroplast genome sequence of Pistia stratiotes (Araceae) and its phylogenetic implications
title_full Characterization of the complete chloroplast genome sequence of Pistia stratiotes (Araceae) and its phylogenetic implications
title_fullStr Characterization of the complete chloroplast genome sequence of Pistia stratiotes (Araceae) and its phylogenetic implications
title_full_unstemmed Characterization of the complete chloroplast genome sequence of Pistia stratiotes (Araceae) and its phylogenetic implications
title_short Characterization of the complete chloroplast genome sequence of Pistia stratiotes (Araceae) and its phylogenetic implications
title_sort characterization of the complete chloroplast genome sequence of pistia stratiotes (araceae) and its phylogenetic implications
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510755/
https://www.ncbi.nlm.nih.gov/pubmed/33366955
http://dx.doi.org/10.1080/23802359.2020.1768935
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