The complete chloroplast genome of Cerasus humilis (Bge.) Sok

The chloroplast (cp) genome sequence of Cerasus humilis has been characterized from Illumina pair-end sequencing. The complete cp genome was 158,082 bp in length, containing a large single-copy region (LSC) of 86,273 bp and a small single copy region (SSC) of 19,039 bp, which were separated by a pai...

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Autores principales: Tian, Ying, Liu, Jing, Xu, Zhe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510817/
https://www.ncbi.nlm.nih.gov/pubmed/33366916
http://dx.doi.org/10.1080/23802359.2020.1730261
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author Tian, Ying
Liu, Jing
Xu, Zhe
author_facet Tian, Ying
Liu, Jing
Xu, Zhe
author_sort Tian, Ying
collection PubMed
description The chloroplast (cp) genome sequence of Cerasus humilis has been characterized from Illumina pair-end sequencing. The complete cp genome was 158,082 bp in length, containing a large single-copy region (LSC) of 86,273 bp and a small single copy region (SSC) of 19,039 bp, which were separated by a pair of 26,385 bp inverted repeat regions (IRs). The genome contained 131 genes, including 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content is 36.7%, while the corresponding values of the LSC, SSC, and IR regions are 34.6, 29.5, and 42.6%, respectively. Phylogenetic reconstruction using 59 conserved coding-protein genes clustered C. humilis within Eurosids I.
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spelling pubmed-75108172020-12-22 The complete chloroplast genome of Cerasus humilis (Bge.) Sok Tian, Ying Liu, Jing Xu, Zhe Mitochondrial DNA B Resour Mitogenome Announcement The chloroplast (cp) genome sequence of Cerasus humilis has been characterized from Illumina pair-end sequencing. The complete cp genome was 158,082 bp in length, containing a large single-copy region (LSC) of 86,273 bp and a small single copy region (SSC) of 19,039 bp, which were separated by a pair of 26,385 bp inverted repeat regions (IRs). The genome contained 131 genes, including 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content is 36.7%, while the corresponding values of the LSC, SSC, and IR regions are 34.6, 29.5, and 42.6%, respectively. Phylogenetic reconstruction using 59 conserved coding-protein genes clustered C. humilis within Eurosids I. Taylor & Francis 2020-03-02 /pmc/articles/PMC7510817/ /pubmed/33366916 http://dx.doi.org/10.1080/23802359.2020.1730261 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Tian, Ying
Liu, Jing
Xu, Zhe
The complete chloroplast genome of Cerasus humilis (Bge.) Sok
title The complete chloroplast genome of Cerasus humilis (Bge.) Sok
title_full The complete chloroplast genome of Cerasus humilis (Bge.) Sok
title_fullStr The complete chloroplast genome of Cerasus humilis (Bge.) Sok
title_full_unstemmed The complete chloroplast genome of Cerasus humilis (Bge.) Sok
title_short The complete chloroplast genome of Cerasus humilis (Bge.) Sok
title_sort complete chloroplast genome of cerasus humilis (bge.) sok
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510817/
https://www.ncbi.nlm.nih.gov/pubmed/33366916
http://dx.doi.org/10.1080/23802359.2020.1730261
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