Characterization of the complete chloroplast genome of Viburnum schensianum (Adoxaceae)

The whole chloroplast (cp) genome sequence of Viburnum schensianum has been characterized from Illumina pair-end sequencing. The complete cp genome was 158,408 bp in length, containing a large single copy region (LSC) of 86,998 bp and a small single copy region (SSC) of 18,386 bp, which were separat...

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Detalles Bibliográficos
Autores principales: Zhao, Yuemei, Zhou, Tao, Chen, Xiaodan, Zhang, Xiao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510822/
https://www.ncbi.nlm.nih.gov/pubmed/33366910
http://dx.doi.org/10.1080/23802359.2020.1731357
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author Zhao, Yuemei
Zhou, Tao
Chen, Xiaodan
Zhang, Xiao
author_facet Zhao, Yuemei
Zhou, Tao
Chen, Xiaodan
Zhang, Xiao
author_sort Zhao, Yuemei
collection PubMed
description The whole chloroplast (cp) genome sequence of Viburnum schensianum has been characterized from Illumina pair-end sequencing. The complete cp genome was 158,408 bp in length, containing a large single copy region (LSC) of 86,998 bp and a small single copy region (SSC) of 18,386 bp, which were separated by a pair of inverted repeat (IR) regions of 26,512 bp. The genome contained 130 genes, including 84 protein-coding genes, 37 tRNA genes, eight ribosomal RNA genes (four rRNA species), and a pseudogene. Most genes occur as a single copy, whereas 16 gene species are duplicated. Phylogenetic analysis revealed that V. schensianum is closely related to the species of V. utile.
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spelling pubmed-75108222020-12-22 Characterization of the complete chloroplast genome of Viburnum schensianum (Adoxaceae) Zhao, Yuemei Zhou, Tao Chen, Xiaodan Zhang, Xiao Mitochondrial DNA B Resour Mitogenome Announcement The whole chloroplast (cp) genome sequence of Viburnum schensianum has been characterized from Illumina pair-end sequencing. The complete cp genome was 158,408 bp in length, containing a large single copy region (LSC) of 86,998 bp and a small single copy region (SSC) of 18,386 bp, which were separated by a pair of inverted repeat (IR) regions of 26,512 bp. The genome contained 130 genes, including 84 protein-coding genes, 37 tRNA genes, eight ribosomal RNA genes (four rRNA species), and a pseudogene. Most genes occur as a single copy, whereas 16 gene species are duplicated. Phylogenetic analysis revealed that V. schensianum is closely related to the species of V. utile. Taylor & Francis 2020-02-28 /pmc/articles/PMC7510822/ /pubmed/33366910 http://dx.doi.org/10.1080/23802359.2020.1731357 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhao, Yuemei
Zhou, Tao
Chen, Xiaodan
Zhang, Xiao
Characterization of the complete chloroplast genome of Viburnum schensianum (Adoxaceae)
title Characterization of the complete chloroplast genome of Viburnum schensianum (Adoxaceae)
title_full Characterization of the complete chloroplast genome of Viburnum schensianum (Adoxaceae)
title_fullStr Characterization of the complete chloroplast genome of Viburnum schensianum (Adoxaceae)
title_full_unstemmed Characterization of the complete chloroplast genome of Viburnum schensianum (Adoxaceae)
title_short Characterization of the complete chloroplast genome of Viburnum schensianum (Adoxaceae)
title_sort characterization of the complete chloroplast genome of viburnum schensianum (adoxaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510822/
https://www.ncbi.nlm.nih.gov/pubmed/33366910
http://dx.doi.org/10.1080/23802359.2020.1731357
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