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TEMPURA: Database of Growth TEMPeratures of Usual and RAre Prokaryotes
Growth temperature is one of the most representative biological parameters for characterizing living organisms. Prokaryotes have been isolated from various temperature environments and show wide diversity in their growth temperatures. We herein constructed a database of growth TEMPeratures of Usual...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions / Japanese Society for Extremophiles
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7511790/ https://www.ncbi.nlm.nih.gov/pubmed/32727974 http://dx.doi.org/10.1264/jsme2.ME20074 |
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author | Sato, Yu Okano, Kenji Kimura, Hiroyuki Honda, Kohsuke |
author_facet | Sato, Yu Okano, Kenji Kimura, Hiroyuki Honda, Kohsuke |
author_sort | Sato, Yu |
collection | PubMed |
description | Growth temperature is one of the most representative biological parameters for characterizing living organisms. Prokaryotes have been isolated from various temperature environments and show wide diversity in their growth temperatures. We herein constructed a database of growth TEMPeratures of Usual and RAre prokaryotes (TEMPURA, http://togodb.org/db/tempura), which contains the minimum, optimum, and maximum growth temperatures of 8,639 prokaryotic strains. Growth temperature information is linked with taxonomy IDs, phylogenies, and genomic information. TEMPURA provides useful information to researchers working on biotechnological applications of extremophiles and their biomolecules as well as those performing fundamental studies on the physiological diversity of prokaryotes. |
format | Online Article Text |
id | pubmed-7511790 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions / Japanese Society for Extremophiles |
record_format | MEDLINE/PubMed |
spelling | pubmed-75117902020-11-18 TEMPURA: Database of Growth TEMPeratures of Usual and RAre Prokaryotes Sato, Yu Okano, Kenji Kimura, Hiroyuki Honda, Kohsuke Microbes Environ Short Communication Growth temperature is one of the most representative biological parameters for characterizing living organisms. Prokaryotes have been isolated from various temperature environments and show wide diversity in their growth temperatures. We herein constructed a database of growth TEMPeratures of Usual and RAre prokaryotes (TEMPURA, http://togodb.org/db/tempura), which contains the minimum, optimum, and maximum growth temperatures of 8,639 prokaryotic strains. Growth temperature information is linked with taxonomy IDs, phylogenies, and genomic information. TEMPURA provides useful information to researchers working on biotechnological applications of extremophiles and their biomolecules as well as those performing fundamental studies on the physiological diversity of prokaryotes. Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions / Japanese Society for Extremophiles 2020 2020-07-29 /pmc/articles/PMC7511790/ /pubmed/32727974 http://dx.doi.org/10.1264/jsme2.ME20074 Text en 2020 by Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions / Japanese Society for Extremophiles. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Communication Sato, Yu Okano, Kenji Kimura, Hiroyuki Honda, Kohsuke TEMPURA: Database of Growth TEMPeratures of Usual and RAre Prokaryotes |
title | TEMPURA: Database of Growth TEMPeratures of Usual and RAre Prokaryotes |
title_full | TEMPURA: Database of Growth TEMPeratures of Usual and RAre Prokaryotes |
title_fullStr | TEMPURA: Database of Growth TEMPeratures of Usual and RAre Prokaryotes |
title_full_unstemmed | TEMPURA: Database of Growth TEMPeratures of Usual and RAre Prokaryotes |
title_short | TEMPURA: Database of Growth TEMPeratures of Usual and RAre Prokaryotes |
title_sort | tempura: database of growth temperatures of usual and rare prokaryotes |
topic | Short Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7511790/ https://www.ncbi.nlm.nih.gov/pubmed/32727974 http://dx.doi.org/10.1264/jsme2.ME20074 |
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