Cargando…

Machine learning-driven electronic identifications of single pathogenic bacteria

A rapid method for screening pathogens can revolutionize health care by enabling infection control through medication before symptom. Here we report on label-free single-cell identifications of clinically-important pathogenic bacteria by using a polymer-integrated low thickness-to-diameter aspect ra...

Descripción completa

Detalles Bibliográficos
Autores principales: Hattori, Shota, Sekido, Rintaro, Leong, Iat Wai, Tsutsui, Makusu, Arima, Akihide, Tanaka, Masayoshi, Yokota, Kazumichi, Washio, Takashi, Kawai, Tomoji, Okochi, Mina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7512020/
https://www.ncbi.nlm.nih.gov/pubmed/32968098
http://dx.doi.org/10.1038/s41598-020-72508-3
_version_ 1783586072233508864
author Hattori, Shota
Sekido, Rintaro
Leong, Iat Wai
Tsutsui, Makusu
Arima, Akihide
Tanaka, Masayoshi
Yokota, Kazumichi
Washio, Takashi
Kawai, Tomoji
Okochi, Mina
author_facet Hattori, Shota
Sekido, Rintaro
Leong, Iat Wai
Tsutsui, Makusu
Arima, Akihide
Tanaka, Masayoshi
Yokota, Kazumichi
Washio, Takashi
Kawai, Tomoji
Okochi, Mina
author_sort Hattori, Shota
collection PubMed
description A rapid method for screening pathogens can revolutionize health care by enabling infection control through medication before symptom. Here we report on label-free single-cell identifications of clinically-important pathogenic bacteria by using a polymer-integrated low thickness-to-diameter aspect ratio pore and machine learning-driven resistive pulse analyses. A high-spatiotemporal resolution of this electrical sensor enabled to observe galvanotactic response intrinsic to the microbes during their translocation. We demonstrated discrimination of the cellular motility via signal pattern classifications in a high-dimensional feature space. As the detection-to-decision can be completed within milliseconds, the present technique may be used for real-time screening of pathogenic bacteria for environmental and medical applications.
format Online
Article
Text
id pubmed-7512020
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-75120202020-09-29 Machine learning-driven electronic identifications of single pathogenic bacteria Hattori, Shota Sekido, Rintaro Leong, Iat Wai Tsutsui, Makusu Arima, Akihide Tanaka, Masayoshi Yokota, Kazumichi Washio, Takashi Kawai, Tomoji Okochi, Mina Sci Rep Article A rapid method for screening pathogens can revolutionize health care by enabling infection control through medication before symptom. Here we report on label-free single-cell identifications of clinically-important pathogenic bacteria by using a polymer-integrated low thickness-to-diameter aspect ratio pore and machine learning-driven resistive pulse analyses. A high-spatiotemporal resolution of this electrical sensor enabled to observe galvanotactic response intrinsic to the microbes during their translocation. We demonstrated discrimination of the cellular motility via signal pattern classifications in a high-dimensional feature space. As the detection-to-decision can be completed within milliseconds, the present technique may be used for real-time screening of pathogenic bacteria for environmental and medical applications. Nature Publishing Group UK 2020-09-23 /pmc/articles/PMC7512020/ /pubmed/32968098 http://dx.doi.org/10.1038/s41598-020-72508-3 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Hattori, Shota
Sekido, Rintaro
Leong, Iat Wai
Tsutsui, Makusu
Arima, Akihide
Tanaka, Masayoshi
Yokota, Kazumichi
Washio, Takashi
Kawai, Tomoji
Okochi, Mina
Machine learning-driven electronic identifications of single pathogenic bacteria
title Machine learning-driven electronic identifications of single pathogenic bacteria
title_full Machine learning-driven electronic identifications of single pathogenic bacteria
title_fullStr Machine learning-driven electronic identifications of single pathogenic bacteria
title_full_unstemmed Machine learning-driven electronic identifications of single pathogenic bacteria
title_short Machine learning-driven electronic identifications of single pathogenic bacteria
title_sort machine learning-driven electronic identifications of single pathogenic bacteria
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7512020/
https://www.ncbi.nlm.nih.gov/pubmed/32968098
http://dx.doi.org/10.1038/s41598-020-72508-3
work_keys_str_mv AT hattorishota machinelearningdrivenelectronicidentificationsofsinglepathogenicbacteria
AT sekidorintaro machinelearningdrivenelectronicidentificationsofsinglepathogenicbacteria
AT leongiatwai machinelearningdrivenelectronicidentificationsofsinglepathogenicbacteria
AT tsutsuimakusu machinelearningdrivenelectronicidentificationsofsinglepathogenicbacteria
AT arimaakihide machinelearningdrivenelectronicidentificationsofsinglepathogenicbacteria
AT tanakamasayoshi machinelearningdrivenelectronicidentificationsofsinglepathogenicbacteria
AT yokotakazumichi machinelearningdrivenelectronicidentificationsofsinglepathogenicbacteria
AT washiotakashi machinelearningdrivenelectronicidentificationsofsinglepathogenicbacteria
AT kawaitomoji machinelearningdrivenelectronicidentificationsofsinglepathogenicbacteria
AT okochimina machinelearningdrivenelectronicidentificationsofsinglepathogenicbacteria