Cargando…

Assessing the Relevance of Specific Response Features in the Neural Code

The study of the neural code aims at deciphering how the nervous system maps external stimuli into neural activity—the encoding phase—and subsequently transforms such activity into adequate responses to the original stimuli—the decoding phase. Several information-theoretical methods have been propos...

Descripción completa

Detalles Bibliográficos
Autores principales: Eyherabide, Hugo Gabriel, Samengo, Inés
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7512461/
https://www.ncbi.nlm.nih.gov/pubmed/33266602
http://dx.doi.org/10.3390/e20110879
_version_ 1783586163438649344
author Eyherabide, Hugo Gabriel
Samengo, Inés
author_facet Eyherabide, Hugo Gabriel
Samengo, Inés
author_sort Eyherabide, Hugo Gabriel
collection PubMed
description The study of the neural code aims at deciphering how the nervous system maps external stimuli into neural activity—the encoding phase—and subsequently transforms such activity into adequate responses to the original stimuli—the decoding phase. Several information-theoretical methods have been proposed to assess the relevance of individual response features, as for example, the spike count of a given neuron, or the amount of correlation in the activity of two cells. These methods work under the premise that the relevance of a feature is reflected in the information loss that is induced by eliminating the feature from the response. The alternative methods differ in the procedure by which the tested feature is removed, and the algorithm with which the lost information is calculated. Here we compare these methods, and show that more often than not, each method assigns a different relevance to the tested feature. We demonstrate that the differences are both quantitative and qualitative, and connect them with the method employed to remove the tested feature, as well as the procedure to calculate the lost information. By studying a collection of carefully designed examples, and working on analytic derivations, we identify the conditions under which the relevance of features diagnosed by different methods can be ranked, or sometimes even equated. The condition for equality involves both the amount and the type of information contributed by the tested feature. We conclude that the quest for relevant response features is more delicate than previously thought, and may yield to multiple answers depending on methodological subtleties.
format Online
Article
Text
id pubmed-7512461
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-75124612020-11-09 Assessing the Relevance of Specific Response Features in the Neural Code Eyherabide, Hugo Gabriel Samengo, Inés Entropy (Basel) Article The study of the neural code aims at deciphering how the nervous system maps external stimuli into neural activity—the encoding phase—and subsequently transforms such activity into adequate responses to the original stimuli—the decoding phase. Several information-theoretical methods have been proposed to assess the relevance of individual response features, as for example, the spike count of a given neuron, or the amount of correlation in the activity of two cells. These methods work under the premise that the relevance of a feature is reflected in the information loss that is induced by eliminating the feature from the response. The alternative methods differ in the procedure by which the tested feature is removed, and the algorithm with which the lost information is calculated. Here we compare these methods, and show that more often than not, each method assigns a different relevance to the tested feature. We demonstrate that the differences are both quantitative and qualitative, and connect them with the method employed to remove the tested feature, as well as the procedure to calculate the lost information. By studying a collection of carefully designed examples, and working on analytic derivations, we identify the conditions under which the relevance of features diagnosed by different methods can be ranked, or sometimes even equated. The condition for equality involves both the amount and the type of information contributed by the tested feature. We conclude that the quest for relevant response features is more delicate than previously thought, and may yield to multiple answers depending on methodological subtleties. MDPI 2018-11-15 /pmc/articles/PMC7512461/ /pubmed/33266602 http://dx.doi.org/10.3390/e20110879 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Eyherabide, Hugo Gabriel
Samengo, Inés
Assessing the Relevance of Specific Response Features in the Neural Code
title Assessing the Relevance of Specific Response Features in the Neural Code
title_full Assessing the Relevance of Specific Response Features in the Neural Code
title_fullStr Assessing the Relevance of Specific Response Features in the Neural Code
title_full_unstemmed Assessing the Relevance of Specific Response Features in the Neural Code
title_short Assessing the Relevance of Specific Response Features in the Neural Code
title_sort assessing the relevance of specific response features in the neural code
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7512461/
https://www.ncbi.nlm.nih.gov/pubmed/33266602
http://dx.doi.org/10.3390/e20110879
work_keys_str_mv AT eyherabidehugogabriel assessingtherelevanceofspecificresponsefeaturesintheneuralcode
AT samengoines assessingtherelevanceofspecificresponsefeaturesintheneuralcode