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Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System
The analysis of cellular signaling cascades based on information thermodynamics has recently developed considerably. A signaling cascade may be considered a binary code system consisting of two types of signaling molecules that carry biological information, phosphorylated active, and non-phosphoryla...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2018
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7512639/ https://www.ncbi.nlm.nih.gov/pubmed/33265236 http://dx.doi.org/10.3390/e20020145 |
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author | Tsuruyama, Tatsuaki |
author_facet | Tsuruyama, Tatsuaki |
author_sort | Tsuruyama, Tatsuaki |
collection | PubMed |
description | The analysis of cellular signaling cascades based on information thermodynamics has recently developed considerably. A signaling cascade may be considered a binary code system consisting of two types of signaling molecules that carry biological information, phosphorylated active, and non-phosphorylated inactive forms. This study aims to evaluate the signal transduction step in cascades from the viewpoint of changes in mixing entropy. An increase in active forms may induce biological signal transduction through a mixing entropy change, which induces a chemical potential current in the signaling cascade. We applied the fluctuation theorem to calculate the chemical potential current and found that the average entropy production current is independent of the step in the whole cascade. As a result, the entropy current carrying signal transduction is defined by the entropy current mobility. |
format | Online Article Text |
id | pubmed-7512639 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-75126392020-11-09 Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System Tsuruyama, Tatsuaki Entropy (Basel) Article The analysis of cellular signaling cascades based on information thermodynamics has recently developed considerably. A signaling cascade may be considered a binary code system consisting of two types of signaling molecules that carry biological information, phosphorylated active, and non-phosphorylated inactive forms. This study aims to evaluate the signal transduction step in cascades from the viewpoint of changes in mixing entropy. An increase in active forms may induce biological signal transduction through a mixing entropy change, which induces a chemical potential current in the signaling cascade. We applied the fluctuation theorem to calculate the chemical potential current and found that the average entropy production current is independent of the step in the whole cascade. As a result, the entropy current carrying signal transduction is defined by the entropy current mobility. MDPI 2018-02-24 /pmc/articles/PMC7512639/ /pubmed/33265236 http://dx.doi.org/10.3390/e20020145 Text en © 2018 by the author. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Tsuruyama, Tatsuaki Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System |
title | Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System |
title_full | Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System |
title_fullStr | Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System |
title_full_unstemmed | Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System |
title_short | Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System |
title_sort | information thermodynamics derives the entropy current of cell signal transduction as a model of a binary coding system |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7512639/ https://www.ncbi.nlm.nih.gov/pubmed/33265236 http://dx.doi.org/10.3390/e20020145 |
work_keys_str_mv | AT tsuruyamatatsuaki informationthermodynamicsderivestheentropycurrentofcellsignaltransductionasamodelofabinarycodingsystem |