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Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System

The analysis of cellular signaling cascades based on information thermodynamics has recently developed considerably. A signaling cascade may be considered a binary code system consisting of two types of signaling molecules that carry biological information, phosphorylated active, and non-phosphoryla...

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Detalles Bibliográficos
Autor principal: Tsuruyama, Tatsuaki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7512639/
https://www.ncbi.nlm.nih.gov/pubmed/33265236
http://dx.doi.org/10.3390/e20020145
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author Tsuruyama, Tatsuaki
author_facet Tsuruyama, Tatsuaki
author_sort Tsuruyama, Tatsuaki
collection PubMed
description The analysis of cellular signaling cascades based on information thermodynamics has recently developed considerably. A signaling cascade may be considered a binary code system consisting of two types of signaling molecules that carry biological information, phosphorylated active, and non-phosphorylated inactive forms. This study aims to evaluate the signal transduction step in cascades from the viewpoint of changes in mixing entropy. An increase in active forms may induce biological signal transduction through a mixing entropy change, which induces a chemical potential current in the signaling cascade. We applied the fluctuation theorem to calculate the chemical potential current and found that the average entropy production current is independent of the step in the whole cascade. As a result, the entropy current carrying signal transduction is defined by the entropy current mobility.
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spelling pubmed-75126392020-11-09 Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System Tsuruyama, Tatsuaki Entropy (Basel) Article The analysis of cellular signaling cascades based on information thermodynamics has recently developed considerably. A signaling cascade may be considered a binary code system consisting of two types of signaling molecules that carry biological information, phosphorylated active, and non-phosphorylated inactive forms. This study aims to evaluate the signal transduction step in cascades from the viewpoint of changes in mixing entropy. An increase in active forms may induce biological signal transduction through a mixing entropy change, which induces a chemical potential current in the signaling cascade. We applied the fluctuation theorem to calculate the chemical potential current and found that the average entropy production current is independent of the step in the whole cascade. As a result, the entropy current carrying signal transduction is defined by the entropy current mobility. MDPI 2018-02-24 /pmc/articles/PMC7512639/ /pubmed/33265236 http://dx.doi.org/10.3390/e20020145 Text en © 2018 by the author. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Tsuruyama, Tatsuaki
Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System
title Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System
title_full Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System
title_fullStr Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System
title_full_unstemmed Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System
title_short Information Thermodynamics Derives the Entropy Current of Cell Signal Transduction as a Model of a Binary Coding System
title_sort information thermodynamics derives the entropy current of cell signal transduction as a model of a binary coding system
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7512639/
https://www.ncbi.nlm.nih.gov/pubmed/33265236
http://dx.doi.org/10.3390/e20020145
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