Cargando…

Intrinsic Computation of a Monod-Wyman-Changeux Molecule

Causal states are minimal sufficient statistics of prediction of a stochastic process, their coding cost is called statistical complexity, and the implied causal structure yields a sense of the process’ “intrinsic computation”. We discuss how statistical complexity changes with slight changes to the...

Descripción completa

Detalles Bibliográficos
Autor principal: Marzen, Sarah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7513124/
https://www.ncbi.nlm.nih.gov/pubmed/33265688
http://dx.doi.org/10.3390/e20080599
_version_ 1783586315864899584
author Marzen, Sarah
author_facet Marzen, Sarah
author_sort Marzen, Sarah
collection PubMed
description Causal states are minimal sufficient statistics of prediction of a stochastic process, their coding cost is called statistical complexity, and the implied causal structure yields a sense of the process’ “intrinsic computation”. We discuss how statistical complexity changes with slight changes to the underlying model– in this case, a biologically-motivated dynamical model, that of a Monod-Wyman-Changeux molecule. Perturbations to kinetic rates cause statistical complexity to jump from finite to infinite. The same is not true for excess entropy, the mutual information between past and future, or for the molecule’s transfer function. We discuss the implications of this for the relationship between intrinsic and functional computation of biological sensory systems.
format Online
Article
Text
id pubmed-7513124
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-75131242020-11-09 Intrinsic Computation of a Monod-Wyman-Changeux Molecule Marzen, Sarah Entropy (Basel) Article Causal states are minimal sufficient statistics of prediction of a stochastic process, their coding cost is called statistical complexity, and the implied causal structure yields a sense of the process’ “intrinsic computation”. We discuss how statistical complexity changes with slight changes to the underlying model– in this case, a biologically-motivated dynamical model, that of a Monod-Wyman-Changeux molecule. Perturbations to kinetic rates cause statistical complexity to jump from finite to infinite. The same is not true for excess entropy, the mutual information between past and future, or for the molecule’s transfer function. We discuss the implications of this for the relationship between intrinsic and functional computation of biological sensory systems. MDPI 2018-08-11 /pmc/articles/PMC7513124/ /pubmed/33265688 http://dx.doi.org/10.3390/e20080599 Text en © 2018 by the author. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Marzen, Sarah
Intrinsic Computation of a Monod-Wyman-Changeux Molecule
title Intrinsic Computation of a Monod-Wyman-Changeux Molecule
title_full Intrinsic Computation of a Monod-Wyman-Changeux Molecule
title_fullStr Intrinsic Computation of a Monod-Wyman-Changeux Molecule
title_full_unstemmed Intrinsic Computation of a Monod-Wyman-Changeux Molecule
title_short Intrinsic Computation of a Monod-Wyman-Changeux Molecule
title_sort intrinsic computation of a monod-wyman-changeux molecule
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7513124/
https://www.ncbi.nlm.nih.gov/pubmed/33265688
http://dx.doi.org/10.3390/e20080599
work_keys_str_mv AT marzensarah intrinsiccomputationofamonodwymanchangeuxmolecule