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A web visualization tool using T cell subsets as the predictor to evaluate COVID-19 patient's severity
Wuhan, China was the epicenter of the 2019 coronavirus outbreak. As a designated hospital for COVID-19, Wuhan Pulmonary Hospital has received over 700 COVID-19 patients. With the COVID-19 becoming a pandemic all over the world, we aim to share our epidemiological and clinical findings with the globa...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7514096/ https://www.ncbi.nlm.nih.gov/pubmed/32970753 http://dx.doi.org/10.1371/journal.pone.0239695 |
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author | Liu, Qibin Fang, Xuemin Tokuno, Shinichi Chung, Ungil Chen, Xianxiang Dai, Xiyong Liu, Xiaoyu Xu, Feng Wang, Bing Peng, Peng |
author_facet | Liu, Qibin Fang, Xuemin Tokuno, Shinichi Chung, Ungil Chen, Xianxiang Dai, Xiyong Liu, Xiaoyu Xu, Feng Wang, Bing Peng, Peng |
author_sort | Liu, Qibin |
collection | PubMed |
description | Wuhan, China was the epicenter of the 2019 coronavirus outbreak. As a designated hospital for COVID-19, Wuhan Pulmonary Hospital has received over 700 COVID-19 patients. With the COVID-19 becoming a pandemic all over the world, we aim to share our epidemiological and clinical findings with the global community. We studied 340 confirmed COVID-19 patients with clear clinical outcomes from Wuhan Pulmonary Hospital, including 310 discharged cases and 30 death cases. We analyzed their demographic, epidemiological, clinical and laboratory data and implemented our findings into an interactive, free access web application to evaluate COVID-19 patient’s severity level. Our results show that baseline T cell subsets results differed significantly between the discharged cases and the death cases in Mann Whitney U test: Total T cells (p < 0.001), Helper T cells (p <0.001), Suppressor T cells (p <0.001), and TH/TSC (Helper/Suppressor ratio, p<0.001). Multivariate logistic regression model with death or discharge as the outcome resulted in the following significant predictors: age (OR 1.05, 95% CI, 1.00 to 1.10), underlying disease status (OR 3.42, 95% CI, 1.30 to 9.95), Helper T cells on the log scale (OR 0.22, 95% CI, 0.12 to 0.40), and TH/TSC on the log scale (OR 4.80, 95% CI, 2.12 to 11.86). The AUC for the logistic regression model is 0.90 (95% CI, 0.84 to 0.95), suggesting the model has a very good predictive power. Our findings suggest that while age and underlying diseases are known risk factors for poor prognosis, patients with a less damaged immune system at the time of hospitalization had higher chance of recovery. Close monitoring of the T cell subsets might provide valuable information of the patient’s condition change during the treatment process. Our web visualization application can be used as a supplementary tool for the evaluation. |
format | Online Article Text |
id | pubmed-7514096 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-75140962020-10-01 A web visualization tool using T cell subsets as the predictor to evaluate COVID-19 patient's severity Liu, Qibin Fang, Xuemin Tokuno, Shinichi Chung, Ungil Chen, Xianxiang Dai, Xiyong Liu, Xiaoyu Xu, Feng Wang, Bing Peng, Peng PLoS One Research Article Wuhan, China was the epicenter of the 2019 coronavirus outbreak. As a designated hospital for COVID-19, Wuhan Pulmonary Hospital has received over 700 COVID-19 patients. With the COVID-19 becoming a pandemic all over the world, we aim to share our epidemiological and clinical findings with the global community. We studied 340 confirmed COVID-19 patients with clear clinical outcomes from Wuhan Pulmonary Hospital, including 310 discharged cases and 30 death cases. We analyzed their demographic, epidemiological, clinical and laboratory data and implemented our findings into an interactive, free access web application to evaluate COVID-19 patient’s severity level. Our results show that baseline T cell subsets results differed significantly between the discharged cases and the death cases in Mann Whitney U test: Total T cells (p < 0.001), Helper T cells (p <0.001), Suppressor T cells (p <0.001), and TH/TSC (Helper/Suppressor ratio, p<0.001). Multivariate logistic regression model with death or discharge as the outcome resulted in the following significant predictors: age (OR 1.05, 95% CI, 1.00 to 1.10), underlying disease status (OR 3.42, 95% CI, 1.30 to 9.95), Helper T cells on the log scale (OR 0.22, 95% CI, 0.12 to 0.40), and TH/TSC on the log scale (OR 4.80, 95% CI, 2.12 to 11.86). The AUC for the logistic regression model is 0.90 (95% CI, 0.84 to 0.95), suggesting the model has a very good predictive power. Our findings suggest that while age and underlying diseases are known risk factors for poor prognosis, patients with a less damaged immune system at the time of hospitalization had higher chance of recovery. Close monitoring of the T cell subsets might provide valuable information of the patient’s condition change during the treatment process. Our web visualization application can be used as a supplementary tool for the evaluation. Public Library of Science 2020-09-24 /pmc/articles/PMC7514096/ /pubmed/32970753 http://dx.doi.org/10.1371/journal.pone.0239695 Text en © 2020 Liu et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Liu, Qibin Fang, Xuemin Tokuno, Shinichi Chung, Ungil Chen, Xianxiang Dai, Xiyong Liu, Xiaoyu Xu, Feng Wang, Bing Peng, Peng A web visualization tool using T cell subsets as the predictor to evaluate COVID-19 patient's severity |
title | A web visualization tool using T cell subsets as the predictor to evaluate COVID-19 patient's severity |
title_full | A web visualization tool using T cell subsets as the predictor to evaluate COVID-19 patient's severity |
title_fullStr | A web visualization tool using T cell subsets as the predictor to evaluate COVID-19 patient's severity |
title_full_unstemmed | A web visualization tool using T cell subsets as the predictor to evaluate COVID-19 patient's severity |
title_short | A web visualization tool using T cell subsets as the predictor to evaluate COVID-19 patient's severity |
title_sort | web visualization tool using t cell subsets as the predictor to evaluate covid-19 patient's severity |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7514096/ https://www.ncbi.nlm.nih.gov/pubmed/32970753 http://dx.doi.org/10.1371/journal.pone.0239695 |
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