Cargando…
Permutation Entropy: Enhancing Discriminating Power by Using Relative Frequencies Vector of Ordinal Patterns Instead of Their Shannon Entropy
Many measures to quantify the nonlinear dynamics of a time series are based on estimating the probability of certain features from their relative frequencies. Once a normalised histogram of events is computed, a single result is usually derived. This process can be broadly viewed as a nonlinear [For...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7514234/ http://dx.doi.org/10.3390/e21101013 |
_version_ | 1783586541101121536 |
---|---|
author | Cuesta-Frau, David Molina-Picó, Antonio Vargas, Borja González, Paula |
author_facet | Cuesta-Frau, David Molina-Picó, Antonio Vargas, Borja González, Paula |
author_sort | Cuesta-Frau, David |
collection | PubMed |
description | Many measures to quantify the nonlinear dynamics of a time series are based on estimating the probability of certain features from their relative frequencies. Once a normalised histogram of events is computed, a single result is usually derived. This process can be broadly viewed as a nonlinear [Formula: see text] mapping into [Formula: see text] , where n is the number of bins in the histogram. However, this mapping might entail a loss of information that could be critical for time series classification purposes. In this respect, the present study assessed such impact using permutation entropy (PE) and a diverse set of time series. We first devised a method of generating synthetic sequences of ordinal patterns using hidden Markov models. This way, it was possible to control the histogram distribution and quantify its influence on classification results. Next, real body temperature records are also used to illustrate the same phenomenon. The experiments results confirmed the improved classification accuracy achieved using raw histogram data instead of the PE final values. Thus, this study can provide a very valuable guidance for the improvement of the discriminating capability not only of PE, but of many similar histogram-based measures. |
format | Online Article Text |
id | pubmed-7514234 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-75142342020-11-09 Permutation Entropy: Enhancing Discriminating Power by Using Relative Frequencies Vector of Ordinal Patterns Instead of Their Shannon Entropy Cuesta-Frau, David Molina-Picó, Antonio Vargas, Borja González, Paula Entropy (Basel) Article Many measures to quantify the nonlinear dynamics of a time series are based on estimating the probability of certain features from their relative frequencies. Once a normalised histogram of events is computed, a single result is usually derived. This process can be broadly viewed as a nonlinear [Formula: see text] mapping into [Formula: see text] , where n is the number of bins in the histogram. However, this mapping might entail a loss of information that could be critical for time series classification purposes. In this respect, the present study assessed such impact using permutation entropy (PE) and a diverse set of time series. We first devised a method of generating synthetic sequences of ordinal patterns using hidden Markov models. This way, it was possible to control the histogram distribution and quantify its influence on classification results. Next, real body temperature records are also used to illustrate the same phenomenon. The experiments results confirmed the improved classification accuracy achieved using raw histogram data instead of the PE final values. Thus, this study can provide a very valuable guidance for the improvement of the discriminating capability not only of PE, but of many similar histogram-based measures. MDPI 2019-10-18 /pmc/articles/PMC7514234/ http://dx.doi.org/10.3390/e21101013 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Cuesta-Frau, David Molina-Picó, Antonio Vargas, Borja González, Paula Permutation Entropy: Enhancing Discriminating Power by Using Relative Frequencies Vector of Ordinal Patterns Instead of Their Shannon Entropy |
title | Permutation Entropy: Enhancing Discriminating Power by Using Relative Frequencies Vector of Ordinal Patterns Instead of Their Shannon Entropy |
title_full | Permutation Entropy: Enhancing Discriminating Power by Using Relative Frequencies Vector of Ordinal Patterns Instead of Their Shannon Entropy |
title_fullStr | Permutation Entropy: Enhancing Discriminating Power by Using Relative Frequencies Vector of Ordinal Patterns Instead of Their Shannon Entropy |
title_full_unstemmed | Permutation Entropy: Enhancing Discriminating Power by Using Relative Frequencies Vector of Ordinal Patterns Instead of Their Shannon Entropy |
title_short | Permutation Entropy: Enhancing Discriminating Power by Using Relative Frequencies Vector of Ordinal Patterns Instead of Their Shannon Entropy |
title_sort | permutation entropy: enhancing discriminating power by using relative frequencies vector of ordinal patterns instead of their shannon entropy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7514234/ http://dx.doi.org/10.3390/e21101013 |
work_keys_str_mv | AT cuestafraudavid permutationentropyenhancingdiscriminatingpowerbyusingrelativefrequenciesvectorofordinalpatternsinsteadoftheirshannonentropy AT molinapicoantonio permutationentropyenhancingdiscriminatingpowerbyusingrelativefrequenciesvectorofordinalpatternsinsteadoftheirshannonentropy AT vargasborja permutationentropyenhancingdiscriminatingpowerbyusingrelativefrequenciesvectorofordinalpatternsinsteadoftheirshannonentropy AT gonzalezpaula permutationentropyenhancingdiscriminatingpowerbyusingrelativefrequenciesvectorofordinalpatternsinsteadoftheirshannonentropy |