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ATP-Dependent Diffusion Entropy and Homogeneity in Living Cells

Intracellular dynamics is highly complex, and includes diffusion of poly-dispersed objects in a non-homogeneous, out-of-equilibrium medium. Assuming non-equilibrium steady-state, we developed a framework that relates non-equilibrium fluctuations to diffusion, and generalized entropy in cells. We emp...

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Detalles Bibliográficos
Autores principales: Wohl, Ishay, Sherman, Eilon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7514293/
http://dx.doi.org/10.3390/e21100962
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author Wohl, Ishay
Sherman, Eilon
author_facet Wohl, Ishay
Sherman, Eilon
author_sort Wohl, Ishay
collection PubMed
description Intracellular dynamics is highly complex, and includes diffusion of poly-dispersed objects in a non-homogeneous, out-of-equilibrium medium. Assuming non-equilibrium steady-state, we developed a framework that relates non-equilibrium fluctuations to diffusion, and generalized entropy in cells. We employed imaging of live Jurkat T cells, and showed that active cells have higher diffusion parameters (K(α) and α) and entropy relative to the same cells after ATP depletion. K(α) and α were related in ATP-depleted cells while this relation was not apparent in untreated cells, probably due to non-equilibrium applied work. Next we evaluated the effect of intracellular diffusion and entropy on the cell content homogeneity, which was displayed by the extent of its liquid–liquid phase separation (LLPS). Correlations between intracellular diffusion parameters, entropy and cell homogeneity could be demonstrated only in active cells while these correlations disappeared after ATP depletion. We conclude that non-equilibrium contributions to diffusivity and entropy by ATP-dependent mechanical work allow cells to control their content homogeneity and LLPS state. Such understanding may enable better intervention in extreme LLPS conditions associated with various cell malignancies and degenerative diseases.
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spelling pubmed-75142932020-11-09 ATP-Dependent Diffusion Entropy and Homogeneity in Living Cells Wohl, Ishay Sherman, Eilon Entropy (Basel) Article Intracellular dynamics is highly complex, and includes diffusion of poly-dispersed objects in a non-homogeneous, out-of-equilibrium medium. Assuming non-equilibrium steady-state, we developed a framework that relates non-equilibrium fluctuations to diffusion, and generalized entropy in cells. We employed imaging of live Jurkat T cells, and showed that active cells have higher diffusion parameters (K(α) and α) and entropy relative to the same cells after ATP depletion. K(α) and α were related in ATP-depleted cells while this relation was not apparent in untreated cells, probably due to non-equilibrium applied work. Next we evaluated the effect of intracellular diffusion and entropy on the cell content homogeneity, which was displayed by the extent of its liquid–liquid phase separation (LLPS). Correlations between intracellular diffusion parameters, entropy and cell homogeneity could be demonstrated only in active cells while these correlations disappeared after ATP depletion. We conclude that non-equilibrium contributions to diffusivity and entropy by ATP-dependent mechanical work allow cells to control their content homogeneity and LLPS state. Such understanding may enable better intervention in extreme LLPS conditions associated with various cell malignancies and degenerative diseases. MDPI 2019-10-01 /pmc/articles/PMC7514293/ http://dx.doi.org/10.3390/e21100962 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wohl, Ishay
Sherman, Eilon
ATP-Dependent Diffusion Entropy and Homogeneity in Living Cells
title ATP-Dependent Diffusion Entropy and Homogeneity in Living Cells
title_full ATP-Dependent Diffusion Entropy and Homogeneity in Living Cells
title_fullStr ATP-Dependent Diffusion Entropy and Homogeneity in Living Cells
title_full_unstemmed ATP-Dependent Diffusion Entropy and Homogeneity in Living Cells
title_short ATP-Dependent Diffusion Entropy and Homogeneity in Living Cells
title_sort atp-dependent diffusion entropy and homogeneity in living cells
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7514293/
http://dx.doi.org/10.3390/e21100962
work_keys_str_mv AT wohlishay atpdependentdiffusionentropyandhomogeneityinlivingcells
AT shermaneilon atpdependentdiffusionentropyandhomogeneityinlivingcells