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A Complexity-Entropy Based Approach for the Detection of Fish Choruses

Automated acoustic indices to infer biological sounds from marine recordings have produced mixed levels of success. The use of such indices in complex marine environments, dominated by several anthropogenic and geophonic sources, have yet to be understood fully. In this study, we introduce a noise r...

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Autores principales: Siddagangaiah, Shashidhar, Chen, Chi-Fang, Hu, Wei-Chun, Pieretti, Nadia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7514308/
http://dx.doi.org/10.3390/e21100977
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author Siddagangaiah, Shashidhar
Chen, Chi-Fang
Hu, Wei-Chun
Pieretti, Nadia
author_facet Siddagangaiah, Shashidhar
Chen, Chi-Fang
Hu, Wei-Chun
Pieretti, Nadia
author_sort Siddagangaiah, Shashidhar
collection PubMed
description Automated acoustic indices to infer biological sounds from marine recordings have produced mixed levels of success. The use of such indices in complex marine environments, dominated by several anthropogenic and geophonic sources, have yet to be understood fully. In this study, we introduce a noise resilient method based on complexity-entropy (hereafter named C-H) for the detection of biophonic sounds originating from fish choruses. The C-H method was tested on data collected in Changhua and Miaoli (Taiwan) during the spring in both 2016 and 2017. Miaoli was exposed to continual shipping activity, which led to an increase of ~10 dB in low frequency ambient noise levels (5–500 Hz). The acoustic dataset was successively analyzed via the acoustic complexity index, the acoustic diversity index and the bioacoustic index. The C-H method was found to be strongly correlated with fish chorusing (Pearson correlation: r(H) < −0.9; r(C) > 0.89), and robust to noise originating from shipping activity or natural sources, such as wind and tides (r(H) and r(C) were between 0.22 and −0.19). Other indices produced lower or null correlations with fish chorusing due to missed identification of the choruses or sensitivity to other sound sources. In contrast to most acoustic indices, the C-H method does not require a prior setting of frequency and amplitude thresholds, and is therefore, more user friendly to untrained technicians. We conclude that the use of the C-H method has potential implications in the efficient detection of fish choruses for management or conservation purposes and could help with overcoming the limitations of acoustic indices in noisy marine environments.
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spelling pubmed-75143082020-11-09 A Complexity-Entropy Based Approach for the Detection of Fish Choruses Siddagangaiah, Shashidhar Chen, Chi-Fang Hu, Wei-Chun Pieretti, Nadia Entropy (Basel) Article Automated acoustic indices to infer biological sounds from marine recordings have produced mixed levels of success. The use of such indices in complex marine environments, dominated by several anthropogenic and geophonic sources, have yet to be understood fully. In this study, we introduce a noise resilient method based on complexity-entropy (hereafter named C-H) for the detection of biophonic sounds originating from fish choruses. The C-H method was tested on data collected in Changhua and Miaoli (Taiwan) during the spring in both 2016 and 2017. Miaoli was exposed to continual shipping activity, which led to an increase of ~10 dB in low frequency ambient noise levels (5–500 Hz). The acoustic dataset was successively analyzed via the acoustic complexity index, the acoustic diversity index and the bioacoustic index. The C-H method was found to be strongly correlated with fish chorusing (Pearson correlation: r(H) < −0.9; r(C) > 0.89), and robust to noise originating from shipping activity or natural sources, such as wind and tides (r(H) and r(C) were between 0.22 and −0.19). Other indices produced lower or null correlations with fish chorusing due to missed identification of the choruses or sensitivity to other sound sources. In contrast to most acoustic indices, the C-H method does not require a prior setting of frequency and amplitude thresholds, and is therefore, more user friendly to untrained technicians. We conclude that the use of the C-H method has potential implications in the efficient detection of fish choruses for management or conservation purposes and could help with overcoming the limitations of acoustic indices in noisy marine environments. MDPI 2019-10-06 /pmc/articles/PMC7514308/ http://dx.doi.org/10.3390/e21100977 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Siddagangaiah, Shashidhar
Chen, Chi-Fang
Hu, Wei-Chun
Pieretti, Nadia
A Complexity-Entropy Based Approach for the Detection of Fish Choruses
title A Complexity-Entropy Based Approach for the Detection of Fish Choruses
title_full A Complexity-Entropy Based Approach for the Detection of Fish Choruses
title_fullStr A Complexity-Entropy Based Approach for the Detection of Fish Choruses
title_full_unstemmed A Complexity-Entropy Based Approach for the Detection of Fish Choruses
title_short A Complexity-Entropy Based Approach for the Detection of Fish Choruses
title_sort complexity-entropy based approach for the detection of fish choruses
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7514308/
http://dx.doi.org/10.3390/e21100977
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