Cargando…

Native de novo structural determinations of non-canonical nucleic acid motifs by X-ray crystallography at long wavelengths

Obtaining phase information remains a formidable challenge for nucleic acid structure determination. The introduction of an X-ray synchrotron beamline designed to be tunable to long wavelengths at Diamond Light Source has opened the possibility to native de novo structure determinations by the use o...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zhang, Yashu, El Omari, Kamel, Duman, Ramona, Liu, Sisi, Haider, Shozeb, Wagner, Armin, Parkinson, Gary N, Wei, Dengguo
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2020
Materias:	Structural Biology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7515729/ https://www.ncbi.nlm.nih.gov/pubmed/32453431 http://dx.doi.org/10.1093/nar/gkaa439

Ejemplares similares

In-vacuum long-wavelength macromolecular crystallography
por: Wagner, Armin, et al.
Publicado: (2016)

Selenium derivatization of nucleic acids for crystallography
por: Jiang, Jiansheng, et al.
Publicado: (2007)

Long-wavelength macromolecular crystallography – First successful native SAD experiment close to the sulfur edge
por: Aurelius, O., et al.
Publicado: (2017)

Experimental phasing opportunities for macromolecular crystallography at very long wavelengths
por: El Omari, Kamel, et al.
Publicado: (2023)

X-ray tomographic reconstruction and segmentation pipeline for the long-wavelength macromolecular crystallography beamline at Diamond Light Source
por: Kazantsev, Daniil, et al.
Publicado: (2021)

Sequence occurrence and structural uniqueness of a G-quadruplex in the human c-kit promoter
por: Todd, Alan K., et al.
Publicado: (2007)

A crystallographic and modelling study of a human telomeric RNA (TERRA) quadruplex
por: Collie, Gavin W., et al.
Publicado: (2010)

Phosphorus and sulfur SAD phasing of the nucleic acid-bound DNA-binding domain of interferon regulatory factor 4
por: Agnarelli, Alessandro, et al.
Publicado: (2021)

Revealing druggable cryptic pockets in the Nsp1 of SARS-CoV-2 and other β-coronaviruses by simulations and crystallography
por: Borsatto, Alberto, et al.
Publicado: (2022)

Crystal structure of a c-kit promoter quadruplex reveals the structural role of metal ions and water molecules in maintaining loop conformation
por: Wei, Dengguo, et al.
Publicado: (2012)

The phosphate clamp: a small and independent motif for nucleic acid backbone recognition
por: Komeda, Seiji, et al.
Publicado: (2011)

Importance of potassium ions for ribosome structure and function revealed by long-wavelength X-ray diffraction
por: Rozov, Alexey, et al.
Publicado: (2019)

The non-canonical hydroxylase structure of YfcM reveals a metal ion-coordination motif required for EF-P hydroxylation
por: Kobayashi, Kan, et al.
Publicado: (2014)

Desolvation of the substrate-binding protein TauA dictates ligand specificity for the alkanesulfonate ABC importer TauABC
por: Qu, Feng, et al.
Publicado: (2019)

Structure and Characterization of Crimean-Congo Hemorrhagic Fever Virus GP38
por: Mishra, Akaash K., et al.
Publicado: (2020)

Flexibility and structural conservation in a c-KIT G-quadruplex
por: Wei, Dengguo, et al.
Publicado: (2015)

Protein structures by spallation neutron crystallography
por: Langan, Paul, et al.
Publicado: (2008)

Conformational dynamics of the human propeller telomeric DNA quadruplex on a microsecond time scale
por: Islam, Barira, et al.
Publicado: (2013)

Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography
por: Mandal, Pradeep K., et al.
Publicado: (2016)

Solution structure of a novel zinc finger motif in the SAP30 polypeptide of the Sin3 corepressor complex and its potential role in nucleic acid recognition
por: He, Yuan, et al.
Publicado: (2009)

Structure-Based Classification Defines the Discrete Conformational Classes Adopted by the Arenaviral GP1
por: Pryce, Rhys, et al.
Publicado: (2018)

Water structure around a left-handed Z-DNA fragment analyzed by cryo neutron crystallography
por: Harp, Joel M, et al.
Publicado: (2021)

Mail-in data collection at SPring-8 protein crystallography beamlines
por: Okazaki, Nobuo, et al.
Publicado: (2008)

Hydrogen bonds of DsrD protein revealed by neutron crystallography
por: Chatake, Toshiyuki, et al.
Publicado: (2008)

Fundamental studies for the proton polarization technique in neutron protein crystallography
por: Tanaka, Ichiro, et al.
Publicado: (2013)

Cryo neutron crystallography demonstrates influence of RNA 2′-OH orientation on conformation, sugar pucker and water structure
por: Harp, Joel M, et al.
Publicado: (2022)

Ultrahigh-resolution crystallography and related electron density and electrostatic properties in proteins
por: Lecomte, Claude, et al.
Publicado: (2008)

Development of an online UV–visible microspectrophotometer for a macromolecular crystallography beamline
por: Shimizu, Nobutaka, et al.
Publicado: (2013)

Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography
por: Keedy, Daniel A, et al.
Publicado: (2015)

Exploring TAR–RNA aptamer loop–loop interaction by X-ray crystallography, UV spectroscopy and surface plasmon resonance
por: Lebars, Isabelle, et al.
Publicado: (2008)

Structural organization of a Type III-A CRISPR effector subcomplex determined by X-ray crystallography and cryo-EM
por: Dorsey, Bryan W, et al.
Publicado: (2019)

The PNA–DNA hybrid I-motif: implications for sugar–sugar contacts in i-motif tetramerization
por: Modi, Souvik, et al.
Publicado: (2006)

Structural motifs in eIF4G and 4E-BPs modulate their binding to eIF4E to regulate translation initiation in yeast
por: Grüner, Stefan, et al.
Publicado: (2018)

Conformational analysis of nucleic acids revisited: Curves+
por: Lavery, R., et al.
Publicado: (2009)

The k-junction motif in RNA structure
por: Wang, Jia, et al.
Publicado: (2014)

AC-motif: a DNA motif containing adenine and cytosine repeat plays a role in gene regulation
por: Hur, Jeong Hwan, et al.
Publicado: (2021)

Loop dependence of the stability and dynamics of nucleic acid hairpins
por: Kuznetsov, Serguei V., et al.
Publicado: (2008)

The crystal structure of an ‘All Locked’ nucleic acid duplex
por: Eichert, André, et al.
Publicado: (2010)

Guanine base stacking in G-quadruplex nucleic acids
por: Lech, Christopher Jacques, et al.
Publicado: (2013)

Implementation of remote monitoring and diffraction evaluation systems at the Photon Factory macromolecular crystallography beamlines
por: Yamada, Yusuke, et al.
Publicado: (2008)

Cannot write session to /tmp/vufind_sessions/sess_eq25733oslmbj235sbtlrk12r6