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Quantifying Total Influence between Variables with Information Theoretic and Machine Learning Techniques

The increasingly sophisticated investigations of complex systems require more robust estimates of the correlations between the measured quantities. The traditional Pearson correlation coefficient is easy to calculate but sensitive only to linear correlations. The total influence between quantities i...

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Autores principales: Murari, Andrea, Rossi, Riccardo, Lungaroni, Michele, Gaudio, Pasquale, Gelfusa, Michela
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7516551/
https://www.ncbi.nlm.nih.gov/pubmed/33285916
http://dx.doi.org/10.3390/e22020141
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author Murari, Andrea
Rossi, Riccardo
Lungaroni, Michele
Gaudio, Pasquale
Gelfusa, Michela
author_facet Murari, Andrea
Rossi, Riccardo
Lungaroni, Michele
Gaudio, Pasquale
Gelfusa, Michela
author_sort Murari, Andrea
collection PubMed
description The increasingly sophisticated investigations of complex systems require more robust estimates of the correlations between the measured quantities. The traditional Pearson correlation coefficient is easy to calculate but sensitive only to linear correlations. The total influence between quantities is, therefore, often expressed in terms of the mutual information, which also takes into account the nonlinear effects but is not normalized. To compare data from different experiments, the information quality ratio is, therefore, in many cases, of easier interpretation. On the other hand, both mutual information and information quality ratio are always positive and, therefore, cannot provide information about the sign of the influence between quantities. Moreover, they require an accurate determination of the probability distribution functions of the variables involved. As the quality and amount of data available are not always sufficient to grant an accurate estimation of the probability distribution functions, it has been investigated whether neural computational tools can help and complement the aforementioned indicators. Specific encoders and autoencoders have been developed for the task of determining the total correlation between quantities related by a functional dependence, including information about the sign of their mutual influence. Both their accuracy and computational efficiencies have been addressed in detail, with extensive numerical tests using synthetic data. A careful analysis of the robustness against noise has also been performed. The neural computational tools typically outperform the traditional indicators in practically every respect.
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spelling pubmed-75165512020-11-09 Quantifying Total Influence between Variables with Information Theoretic and Machine Learning Techniques Murari, Andrea Rossi, Riccardo Lungaroni, Michele Gaudio, Pasquale Gelfusa, Michela Entropy (Basel) Article The increasingly sophisticated investigations of complex systems require more robust estimates of the correlations between the measured quantities. The traditional Pearson correlation coefficient is easy to calculate but sensitive only to linear correlations. The total influence between quantities is, therefore, often expressed in terms of the mutual information, which also takes into account the nonlinear effects but is not normalized. To compare data from different experiments, the information quality ratio is, therefore, in many cases, of easier interpretation. On the other hand, both mutual information and information quality ratio are always positive and, therefore, cannot provide information about the sign of the influence between quantities. Moreover, they require an accurate determination of the probability distribution functions of the variables involved. As the quality and amount of data available are not always sufficient to grant an accurate estimation of the probability distribution functions, it has been investigated whether neural computational tools can help and complement the aforementioned indicators. Specific encoders and autoencoders have been developed for the task of determining the total correlation between quantities related by a functional dependence, including information about the sign of their mutual influence. Both their accuracy and computational efficiencies have been addressed in detail, with extensive numerical tests using synthetic data. A careful analysis of the robustness against noise has also been performed. The neural computational tools typically outperform the traditional indicators in practically every respect. MDPI 2020-01-24 /pmc/articles/PMC7516551/ /pubmed/33285916 http://dx.doi.org/10.3390/e22020141 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Murari, Andrea
Rossi, Riccardo
Lungaroni, Michele
Gaudio, Pasquale
Gelfusa, Michela
Quantifying Total Influence between Variables with Information Theoretic and Machine Learning Techniques
title Quantifying Total Influence between Variables with Information Theoretic and Machine Learning Techniques
title_full Quantifying Total Influence between Variables with Information Theoretic and Machine Learning Techniques
title_fullStr Quantifying Total Influence between Variables with Information Theoretic and Machine Learning Techniques
title_full_unstemmed Quantifying Total Influence between Variables with Information Theoretic and Machine Learning Techniques
title_short Quantifying Total Influence between Variables with Information Theoretic and Machine Learning Techniques
title_sort quantifying total influence between variables with information theoretic and machine learning techniques
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7516551/
https://www.ncbi.nlm.nih.gov/pubmed/33285916
http://dx.doi.org/10.3390/e22020141
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