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Gaussian Process Based Expected Information Gain Computation for Bayesian Optimal Design
Optimal experimental design (OED) is of great significance in efficient Bayesian inversion. A popular choice of OED methods is based on maximizing the expected information gain (EIG), where expensive likelihood functions are typically involved. To reduce the computational cost, in this work, a novel...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7516703/ https://www.ncbi.nlm.nih.gov/pubmed/33286031 http://dx.doi.org/10.3390/e22020258 |
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author | Xu, Zhihang Liao, Qifeng |
author_facet | Xu, Zhihang Liao, Qifeng |
author_sort | Xu, Zhihang |
collection | PubMed |
description | Optimal experimental design (OED) is of great significance in efficient Bayesian inversion. A popular choice of OED methods is based on maximizing the expected information gain (EIG), where expensive likelihood functions are typically involved. To reduce the computational cost, in this work, a novel double-loop Bayesian Monte Carlo (DLBMC) method is developed to efficiently compute the EIG, and a Bayesian optimization (BO) strategy is proposed to obtain its maximizer only using a small number of samples. For Bayesian Monte Carlo posed on uniform and normal distributions, our analysis provides explicit expressions for the mean estimates and the bounds of their variances. The accuracy and the efficiency of our DLBMC and BO based optimal design are validated and demonstrated with numerical experiments. |
format | Online Article Text |
id | pubmed-7516703 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-75167032020-11-09 Gaussian Process Based Expected Information Gain Computation for Bayesian Optimal Design Xu, Zhihang Liao, Qifeng Entropy (Basel) Article Optimal experimental design (OED) is of great significance in efficient Bayesian inversion. A popular choice of OED methods is based on maximizing the expected information gain (EIG), where expensive likelihood functions are typically involved. To reduce the computational cost, in this work, a novel double-loop Bayesian Monte Carlo (DLBMC) method is developed to efficiently compute the EIG, and a Bayesian optimization (BO) strategy is proposed to obtain its maximizer only using a small number of samples. For Bayesian Monte Carlo posed on uniform and normal distributions, our analysis provides explicit expressions for the mean estimates and the bounds of their variances. The accuracy and the efficiency of our DLBMC and BO based optimal design are validated and demonstrated with numerical experiments. MDPI 2020-02-24 /pmc/articles/PMC7516703/ /pubmed/33286031 http://dx.doi.org/10.3390/e22020258 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Xu, Zhihang Liao, Qifeng Gaussian Process Based Expected Information Gain Computation for Bayesian Optimal Design |
title | Gaussian Process Based Expected Information Gain Computation for Bayesian Optimal Design |
title_full | Gaussian Process Based Expected Information Gain Computation for Bayesian Optimal Design |
title_fullStr | Gaussian Process Based Expected Information Gain Computation for Bayesian Optimal Design |
title_full_unstemmed | Gaussian Process Based Expected Information Gain Computation for Bayesian Optimal Design |
title_short | Gaussian Process Based Expected Information Gain Computation for Bayesian Optimal Design |
title_sort | gaussian process based expected information gain computation for bayesian optimal design |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7516703/ https://www.ncbi.nlm.nih.gov/pubmed/33286031 http://dx.doi.org/10.3390/e22020258 |
work_keys_str_mv | AT xuzhihang gaussianprocessbasedexpectedinformationgaincomputationforbayesianoptimaldesign AT liaoqifeng gaussianprocessbasedexpectedinformationgaincomputationforbayesianoptimaldesign |