Cargando…
Statistical Approaches for the Analysis of Dependency Among Neurons Under Noise
Neuronal noise is a major factor affecting the communication between coupled neurons. In this work, we propose a statistical toolset to infer the coupling between two neurons under noise. We estimate these statistical dependencies from data which are generated by a coupled Hodgkin–Huxley (HH) model...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7516863/ https://www.ncbi.nlm.nih.gov/pubmed/33286161 http://dx.doi.org/10.3390/e22040387 |
_version_ | 1783587097049825280 |
---|---|
author | Gençağa, Deniz Şengül Ayan, Sevgi Farnoudkia, Hajar Okuyucu, Serdar |
author_facet | Gençağa, Deniz Şengül Ayan, Sevgi Farnoudkia, Hajar Okuyucu, Serdar |
author_sort | Gençağa, Deniz |
collection | PubMed |
description | Neuronal noise is a major factor affecting the communication between coupled neurons. In this work, we propose a statistical toolset to infer the coupling between two neurons under noise. We estimate these statistical dependencies from data which are generated by a coupled Hodgkin–Huxley (HH) model with additive noise. To infer the coupling using observation data, we employ copulas and information-theoretic quantities, such as the mutual information (MI) and the transfer entropy (TE). Copulas and MI between two variables are symmetric quantities, whereas TE is asymmetric. We demonstrate the performances of copulas and MI as functions of different noise levels and show that they are effective in the identification of the interactions due to coupling and noise. Moreover, we analyze the inference of TE values between neurons as a function of noise and conclude that TE is an effective tool for finding out the direction of coupling between neurons under the effects of noise. |
format | Online Article Text |
id | pubmed-7516863 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-75168632020-11-09 Statistical Approaches for the Analysis of Dependency Among Neurons Under Noise Gençağa, Deniz Şengül Ayan, Sevgi Farnoudkia, Hajar Okuyucu, Serdar Entropy (Basel) Article Neuronal noise is a major factor affecting the communication between coupled neurons. In this work, we propose a statistical toolset to infer the coupling between two neurons under noise. We estimate these statistical dependencies from data which are generated by a coupled Hodgkin–Huxley (HH) model with additive noise. To infer the coupling using observation data, we employ copulas and information-theoretic quantities, such as the mutual information (MI) and the transfer entropy (TE). Copulas and MI between two variables are symmetric quantities, whereas TE is asymmetric. We demonstrate the performances of copulas and MI as functions of different noise levels and show that they are effective in the identification of the interactions due to coupling and noise. Moreover, we analyze the inference of TE values between neurons as a function of noise and conclude that TE is an effective tool for finding out the direction of coupling between neurons under the effects of noise. MDPI 2020-03-28 /pmc/articles/PMC7516863/ /pubmed/33286161 http://dx.doi.org/10.3390/e22040387 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Gençağa, Deniz Şengül Ayan, Sevgi Farnoudkia, Hajar Okuyucu, Serdar Statistical Approaches for the Analysis of Dependency Among Neurons Under Noise |
title | Statistical Approaches for the Analysis of Dependency Among Neurons Under Noise |
title_full | Statistical Approaches for the Analysis of Dependency Among Neurons Under Noise |
title_fullStr | Statistical Approaches for the Analysis of Dependency Among Neurons Under Noise |
title_full_unstemmed | Statistical Approaches for the Analysis of Dependency Among Neurons Under Noise |
title_short | Statistical Approaches for the Analysis of Dependency Among Neurons Under Noise |
title_sort | statistical approaches for the analysis of dependency among neurons under noise |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7516863/ https://www.ncbi.nlm.nih.gov/pubmed/33286161 http://dx.doi.org/10.3390/e22040387 |
work_keys_str_mv | AT gencagadeniz statisticalapproachesfortheanalysisofdependencyamongneuronsundernoise AT sengulayansevgi statisticalapproachesfortheanalysisofdependencyamongneuronsundernoise AT farnoudkiahajar statisticalapproachesfortheanalysisofdependencyamongneuronsundernoise AT okuyucuserdar statisticalapproachesfortheanalysisofdependencyamongneuronsundernoise |