Cargando…
Network Rewiring in the r-K Plane
We generate correlated scale-free networks in the configuration model through a new rewiring algorithm that allows one to tune the Newman assortativity coefficient r and the average degree of the nearest neighbors K (in the range [Formula: see text] , [Formula: see text]). At each attempted rewiring...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7517188/ https://www.ncbi.nlm.nih.gov/pubmed/33286425 http://dx.doi.org/10.3390/e22060653 |
_version_ | 1783587172535762944 |
---|---|
author | Bertotti, Maria Letizia Modanese, Giovanni |
author_facet | Bertotti, Maria Letizia Modanese, Giovanni |
author_sort | Bertotti, Maria Letizia |
collection | PubMed |
description | We generate correlated scale-free networks in the configuration model through a new rewiring algorithm that allows one to tune the Newman assortativity coefficient r and the average degree of the nearest neighbors K (in the range [Formula: see text] , [Formula: see text]). At each attempted rewiring step, local variations [Formula: see text] and [Formula: see text] are computed and then the step is accepted according to a standard Metropolis probability [Formula: see text] , where T is a variable temperature. We prove a general relation between [Formula: see text] and [Formula: see text] , thus finding a connection between two variables that have very different definitions and topological meaning. We describe rewiring trajectories in the r-K plane and explore the limits of maximally assortative and disassortative networks, including the case of small minimum degree ([Formula: see text]), which has previously not been considered. The size of the giant component and the entropy of the network are monitored in the rewiring. The average number of second neighbors in the branching approximation [Formula: see text] is proven to be constant in the rewiring, and independent from the correlations for Markovian networks. As a function of the degree, however, the number of second neighbors gives useful information on the network connectivity and is also monitored. |
format | Online Article Text |
id | pubmed-7517188 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-75171882020-11-09 Network Rewiring in the r-K Plane Bertotti, Maria Letizia Modanese, Giovanni Entropy (Basel) Article We generate correlated scale-free networks in the configuration model through a new rewiring algorithm that allows one to tune the Newman assortativity coefficient r and the average degree of the nearest neighbors K (in the range [Formula: see text] , [Formula: see text]). At each attempted rewiring step, local variations [Formula: see text] and [Formula: see text] are computed and then the step is accepted according to a standard Metropolis probability [Formula: see text] , where T is a variable temperature. We prove a general relation between [Formula: see text] and [Formula: see text] , thus finding a connection between two variables that have very different definitions and topological meaning. We describe rewiring trajectories in the r-K plane and explore the limits of maximally assortative and disassortative networks, including the case of small minimum degree ([Formula: see text]), which has previously not been considered. The size of the giant component and the entropy of the network are monitored in the rewiring. The average number of second neighbors in the branching approximation [Formula: see text] is proven to be constant in the rewiring, and independent from the correlations for Markovian networks. As a function of the degree, however, the number of second neighbors gives useful information on the network connectivity and is also monitored. MDPI 2020-06-13 /pmc/articles/PMC7517188/ /pubmed/33286425 http://dx.doi.org/10.3390/e22060653 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Bertotti, Maria Letizia Modanese, Giovanni Network Rewiring in the r-K Plane |
title | Network Rewiring in the r-K Plane |
title_full | Network Rewiring in the r-K Plane |
title_fullStr | Network Rewiring in the r-K Plane |
title_full_unstemmed | Network Rewiring in the r-K Plane |
title_short | Network Rewiring in the r-K Plane |
title_sort | network rewiring in the r-k plane |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7517188/ https://www.ncbi.nlm.nih.gov/pubmed/33286425 http://dx.doi.org/10.3390/e22060653 |
work_keys_str_mv | AT bertottimarialetizia networkrewiringintherkplane AT modanesegiovanni networkrewiringintherkplane |