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Separated Channel Attention Convolutional Neural Network (SC-CNN-Attention) to Identify ADHD in Multi-Site Rs-fMRI Dataset

The accurate identification of an attention deficit hyperactivity disorder (ADHD) subject has remained a challenge for both neuroscience research and clinical diagnosis. Unfortunately, the traditional methods concerning the classification model and feature extraction usually depend on the single-cha...

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Autores principales: Zhang, Tao, Li, Cunbo, Li, Peiyang, Peng, Yueheng, Kang, Xiaodong, Jiang, Chenyang, Li, Fali, Zhu, Xuyang, Yao, Dezhong, Biswal, Bharat, Xu, Peng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7517519/
https://www.ncbi.nlm.nih.gov/pubmed/33286662
http://dx.doi.org/10.3390/e22080893
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author Zhang, Tao
Li, Cunbo
Li, Peiyang
Peng, Yueheng
Kang, Xiaodong
Jiang, Chenyang
Li, Fali
Zhu, Xuyang
Yao, Dezhong
Biswal, Bharat
Xu, Peng
author_facet Zhang, Tao
Li, Cunbo
Li, Peiyang
Peng, Yueheng
Kang, Xiaodong
Jiang, Chenyang
Li, Fali
Zhu, Xuyang
Yao, Dezhong
Biswal, Bharat
Xu, Peng
author_sort Zhang, Tao
collection PubMed
description The accurate identification of an attention deficit hyperactivity disorder (ADHD) subject has remained a challenge for both neuroscience research and clinical diagnosis. Unfortunately, the traditional methods concerning the classification model and feature extraction usually depend on the single-channel model and static measurements (i.e., functional connectivity, FC) in the small, homogenous single-site dataset, which is limited and may cause the loss of intrinsic information in functional MRI (fMRI). In this study, we proposed a new two-stage network structure by combing a separated channel convolutional neural network (SC-CNN) with an attention-based network (SC-CNN-attention) to discriminate ADHD and healthy controls on a large-scale multi-site database (5 sites and n = 1019). To utilize both intrinsic temporal feature and the interactions of temporal dependent in whole-brain resting-state fMRI, in the first stage of our proposed network structure, a SC- CNN is used to learn the temporal feature of each brain region, and an attention network in the second stage is adopted to capture temporal dependent features among regions and extract fusion features. Using a “leave-one-site-out” cross-validation framework, our proposed method obtained a mean classification accuracy of 68.6% on five different sites, which is higher than those reported in previous studies. The classification results demonstrate that our proposed network is robust to data variants and is also replicated across sites. The combination of the SC-CNN with the attention network is powerful to capture the intrinsic fMRI information to discriminate ADHD across multi-site resting-state fMRI data.
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spelling pubmed-75175192020-11-09 Separated Channel Attention Convolutional Neural Network (SC-CNN-Attention) to Identify ADHD in Multi-Site Rs-fMRI Dataset Zhang, Tao Li, Cunbo Li, Peiyang Peng, Yueheng Kang, Xiaodong Jiang, Chenyang Li, Fali Zhu, Xuyang Yao, Dezhong Biswal, Bharat Xu, Peng Entropy (Basel) Article The accurate identification of an attention deficit hyperactivity disorder (ADHD) subject has remained a challenge for both neuroscience research and clinical diagnosis. Unfortunately, the traditional methods concerning the classification model and feature extraction usually depend on the single-channel model and static measurements (i.e., functional connectivity, FC) in the small, homogenous single-site dataset, which is limited and may cause the loss of intrinsic information in functional MRI (fMRI). In this study, we proposed a new two-stage network structure by combing a separated channel convolutional neural network (SC-CNN) with an attention-based network (SC-CNN-attention) to discriminate ADHD and healthy controls on a large-scale multi-site database (5 sites and n = 1019). To utilize both intrinsic temporal feature and the interactions of temporal dependent in whole-brain resting-state fMRI, in the first stage of our proposed network structure, a SC- CNN is used to learn the temporal feature of each brain region, and an attention network in the second stage is adopted to capture temporal dependent features among regions and extract fusion features. Using a “leave-one-site-out” cross-validation framework, our proposed method obtained a mean classification accuracy of 68.6% on five different sites, which is higher than those reported in previous studies. The classification results demonstrate that our proposed network is robust to data variants and is also replicated across sites. The combination of the SC-CNN with the attention network is powerful to capture the intrinsic fMRI information to discriminate ADHD across multi-site resting-state fMRI data. MDPI 2020-08-14 /pmc/articles/PMC7517519/ /pubmed/33286662 http://dx.doi.org/10.3390/e22080893 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhang, Tao
Li, Cunbo
Li, Peiyang
Peng, Yueheng
Kang, Xiaodong
Jiang, Chenyang
Li, Fali
Zhu, Xuyang
Yao, Dezhong
Biswal, Bharat
Xu, Peng
Separated Channel Attention Convolutional Neural Network (SC-CNN-Attention) to Identify ADHD in Multi-Site Rs-fMRI Dataset
title Separated Channel Attention Convolutional Neural Network (SC-CNN-Attention) to Identify ADHD in Multi-Site Rs-fMRI Dataset
title_full Separated Channel Attention Convolutional Neural Network (SC-CNN-Attention) to Identify ADHD in Multi-Site Rs-fMRI Dataset
title_fullStr Separated Channel Attention Convolutional Neural Network (SC-CNN-Attention) to Identify ADHD in Multi-Site Rs-fMRI Dataset
title_full_unstemmed Separated Channel Attention Convolutional Neural Network (SC-CNN-Attention) to Identify ADHD in Multi-Site Rs-fMRI Dataset
title_short Separated Channel Attention Convolutional Neural Network (SC-CNN-Attention) to Identify ADHD in Multi-Site Rs-fMRI Dataset
title_sort separated channel attention convolutional neural network (sc-cnn-attention) to identify adhd in multi-site rs-fmri dataset
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7517519/
https://www.ncbi.nlm.nih.gov/pubmed/33286662
http://dx.doi.org/10.3390/e22080893
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