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Colorectal Cancer Detection Based on Deep Learning
INTRODUCTION: The initial point in the diagnostic workup of solid tumors remains manual, with the assessment of hematoxylin and eosin (H&E)-stained tissue sections by microscopy. This is a labor-intensive step that requires attention to detail. In addition, diagnoses are influenced by an individ...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Wolters Kluwer - Medknow
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7518343/ https://www.ncbi.nlm.nih.gov/pubmed/33042607 http://dx.doi.org/10.4103/jpi.jpi_68_19 |
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author | Xu, Lin Walker, Blair Liang, Peir-In Tong, Yi Xu, Cheng Su, Yu Chun Karsan, Aly |
author_facet | Xu, Lin Walker, Blair Liang, Peir-In Tong, Yi Xu, Cheng Su, Yu Chun Karsan, Aly |
author_sort | Xu, Lin |
collection | PubMed |
description | INTRODUCTION: The initial point in the diagnostic workup of solid tumors remains manual, with the assessment of hematoxylin and eosin (H&E)-stained tissue sections by microscopy. This is a labor-intensive step that requires attention to detail. In addition, diagnoses are influenced by an individual pathologist's knowledge and experience and may not always be reproducible between pathologists. METHODS: We introduce a deep learning-based method in colorectal cancer detection and segmentation from digitized H&E-stained histology slides. RESULTS: In this study, we demonstrate that this neural network approach produces median accuracy of 99.9% for normal slides and 94.8% for cancer slides compared to pathologist-based diagnosis on H&E-stained slides digitized from clinical samples. CONCLUSION: Given that our approach has very high accuracy on normal slides, use of neural network algorithms may provide a screening approach to save pathologist time in identifying tumor regions. We suggest that this new method may be a powerful assistant for colorectal cancer diagnostics. |
format | Online Article Text |
id | pubmed-7518343 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Wolters Kluwer - Medknow |
record_format | MEDLINE/PubMed |
spelling | pubmed-75183432020-10-09 Colorectal Cancer Detection Based on Deep Learning Xu, Lin Walker, Blair Liang, Peir-In Tong, Yi Xu, Cheng Su, Yu Chun Karsan, Aly J Pathol Inform Original Article INTRODUCTION: The initial point in the diagnostic workup of solid tumors remains manual, with the assessment of hematoxylin and eosin (H&E)-stained tissue sections by microscopy. This is a labor-intensive step that requires attention to detail. In addition, diagnoses are influenced by an individual pathologist's knowledge and experience and may not always be reproducible between pathologists. METHODS: We introduce a deep learning-based method in colorectal cancer detection and segmentation from digitized H&E-stained histology slides. RESULTS: In this study, we demonstrate that this neural network approach produces median accuracy of 99.9% for normal slides and 94.8% for cancer slides compared to pathologist-based diagnosis on H&E-stained slides digitized from clinical samples. CONCLUSION: Given that our approach has very high accuracy on normal slides, use of neural network algorithms may provide a screening approach to save pathologist time in identifying tumor regions. We suggest that this new method may be a powerful assistant for colorectal cancer diagnostics. Wolters Kluwer - Medknow 2020-08-21 /pmc/articles/PMC7518343/ /pubmed/33042607 http://dx.doi.org/10.4103/jpi.jpi_68_19 Text en Copyright: © 2020 Journal of Pathology Informatics http://creativecommons.org/licenses/by-nc-sa/4.0 This is an open access journal, and articles are distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 License, which allows others to remix, tweak, and build upon the work non-commercially, as long as appropriate credit is given and the new creations are licensed under the identical terms. |
spellingShingle | Original Article Xu, Lin Walker, Blair Liang, Peir-In Tong, Yi Xu, Cheng Su, Yu Chun Karsan, Aly Colorectal Cancer Detection Based on Deep Learning |
title | Colorectal Cancer Detection Based on Deep Learning |
title_full | Colorectal Cancer Detection Based on Deep Learning |
title_fullStr | Colorectal Cancer Detection Based on Deep Learning |
title_full_unstemmed | Colorectal Cancer Detection Based on Deep Learning |
title_short | Colorectal Cancer Detection Based on Deep Learning |
title_sort | colorectal cancer detection based on deep learning |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7518343/ https://www.ncbi.nlm.nih.gov/pubmed/33042607 http://dx.doi.org/10.4103/jpi.jpi_68_19 |
work_keys_str_mv | AT xulin colorectalcancerdetectionbasedondeeplearning AT walkerblair colorectalcancerdetectionbasedondeeplearning AT liangpeirin colorectalcancerdetectionbasedondeeplearning AT tongyi colorectalcancerdetectionbasedondeeplearning AT xucheng colorectalcancerdetectionbasedondeeplearning AT suyuchun colorectalcancerdetectionbasedondeeplearning AT karsanaly colorectalcancerdetectionbasedondeeplearning |