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Colorectal Cancer Detection Based on Deep Learning

INTRODUCTION: The initial point in the diagnostic workup of solid tumors remains manual, with the assessment of hematoxylin and eosin (H&E)-stained tissue sections by microscopy. This is a labor-intensive step that requires attention to detail. In addition, diagnoses are influenced by an individ...

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Autores principales: Xu, Lin, Walker, Blair, Liang, Peir-In, Tong, Yi, Xu, Cheng, Su, Yu Chun, Karsan, Aly
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer - Medknow 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7518343/
https://www.ncbi.nlm.nih.gov/pubmed/33042607
http://dx.doi.org/10.4103/jpi.jpi_68_19
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author Xu, Lin
Walker, Blair
Liang, Peir-In
Tong, Yi
Xu, Cheng
Su, Yu Chun
Karsan, Aly
author_facet Xu, Lin
Walker, Blair
Liang, Peir-In
Tong, Yi
Xu, Cheng
Su, Yu Chun
Karsan, Aly
author_sort Xu, Lin
collection PubMed
description INTRODUCTION: The initial point in the diagnostic workup of solid tumors remains manual, with the assessment of hematoxylin and eosin (H&E)-stained tissue sections by microscopy. This is a labor-intensive step that requires attention to detail. In addition, diagnoses are influenced by an individual pathologist's knowledge and experience and may not always be reproducible between pathologists. METHODS: We introduce a deep learning-based method in colorectal cancer detection and segmentation from digitized H&E-stained histology slides. RESULTS: In this study, we demonstrate that this neural network approach produces median accuracy of 99.9% for normal slides and 94.8% for cancer slides compared to pathologist-based diagnosis on H&E-stained slides digitized from clinical samples. CONCLUSION: Given that our approach has very high accuracy on normal slides, use of neural network algorithms may provide a screening approach to save pathologist time in identifying tumor regions. We suggest that this new method may be a powerful assistant for colorectal cancer diagnostics.
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spelling pubmed-75183432020-10-09 Colorectal Cancer Detection Based on Deep Learning Xu, Lin Walker, Blair Liang, Peir-In Tong, Yi Xu, Cheng Su, Yu Chun Karsan, Aly J Pathol Inform Original Article INTRODUCTION: The initial point in the diagnostic workup of solid tumors remains manual, with the assessment of hematoxylin and eosin (H&E)-stained tissue sections by microscopy. This is a labor-intensive step that requires attention to detail. In addition, diagnoses are influenced by an individual pathologist's knowledge and experience and may not always be reproducible between pathologists. METHODS: We introduce a deep learning-based method in colorectal cancer detection and segmentation from digitized H&E-stained histology slides. RESULTS: In this study, we demonstrate that this neural network approach produces median accuracy of 99.9% for normal slides and 94.8% for cancer slides compared to pathologist-based diagnosis on H&E-stained slides digitized from clinical samples. CONCLUSION: Given that our approach has very high accuracy on normal slides, use of neural network algorithms may provide a screening approach to save pathologist time in identifying tumor regions. We suggest that this new method may be a powerful assistant for colorectal cancer diagnostics. Wolters Kluwer - Medknow 2020-08-21 /pmc/articles/PMC7518343/ /pubmed/33042607 http://dx.doi.org/10.4103/jpi.jpi_68_19 Text en Copyright: © 2020 Journal of Pathology Informatics http://creativecommons.org/licenses/by-nc-sa/4.0 This is an open access journal, and articles are distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 License, which allows others to remix, tweak, and build upon the work non-commercially, as long as appropriate credit is given and the new creations are licensed under the identical terms.
spellingShingle Original Article
Xu, Lin
Walker, Blair
Liang, Peir-In
Tong, Yi
Xu, Cheng
Su, Yu Chun
Karsan, Aly
Colorectal Cancer Detection Based on Deep Learning
title Colorectal Cancer Detection Based on Deep Learning
title_full Colorectal Cancer Detection Based on Deep Learning
title_fullStr Colorectal Cancer Detection Based on Deep Learning
title_full_unstemmed Colorectal Cancer Detection Based on Deep Learning
title_short Colorectal Cancer Detection Based on Deep Learning
title_sort colorectal cancer detection based on deep learning
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7518343/
https://www.ncbi.nlm.nih.gov/pubmed/33042607
http://dx.doi.org/10.4103/jpi.jpi_68_19
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