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SNAI1 is a prognostic biomarker and correlated with immune infiltrates in gastrointestinal cancers

Epithelial-mesenchymal transition (EMT)-related genes play an important role in immunosuppression. However, the correlations of EMT-related genes to prognosis and tumor-infiltrating lymphocytes in different cancers remain unclear. TCGA, GEO databases were used to analyze the expression, prognosis, a...

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Detalles Bibliográficos
Autores principales: Fang, Jiaying, Ding, Zan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7521489/
https://www.ncbi.nlm.nih.gov/pubmed/32833672
http://dx.doi.org/10.18632/aging.103667
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author Fang, Jiaying
Ding, Zan
author_facet Fang, Jiaying
Ding, Zan
author_sort Fang, Jiaying
collection PubMed
description Epithelial-mesenchymal transition (EMT)-related genes play an important role in immunosuppression. However, the correlations of EMT-related genes to prognosis and tumor-infiltrating lymphocytes in different cancers remain unclear. TCGA, GEO databases were used to analyze the expression, prognosis, and immune infiltration of EMT markers in cancer. RT-qPCR, immunohistochemistry, and western blot were used to analysis the expression and prognosis of SNAI1 in gastrointestinal cancers. High SNAI1 expression was closely related with poorer overall survival in gastrointestinal cancers in TCGA cohort. High SNAI1 expression was closely related with poorer overall survival in gastrointestinal cancers, and was validated in GEO database. Simultaneously, high expression of SNAI1 correlates with clinical relevance of gastric cancer. Moreover, SNAI1 expression was associated with tumor-infiltrating immune cells in gastrointestinal cancers. In addition, RT-qPCR, immunohistochemistry, and western blot showed SNAI1 expression was higher in gastrointestinal cancers compared to the normal tissues. Finally, high SNAI1 expression was closely related with poorer overall survival and correlates with clinical relevance of gastrointestinal cancers in an independent validation cohort. In summary, the results approaches to suggest that SNAI1 can be used as a prognostic biomarker for determining prognosis and immune infiltration in gastrointestinal cancers.
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spelling pubmed-75214892020-10-02 SNAI1 is a prognostic biomarker and correlated with immune infiltrates in gastrointestinal cancers Fang, Jiaying Ding, Zan Aging (Albany NY) Research Paper Epithelial-mesenchymal transition (EMT)-related genes play an important role in immunosuppression. However, the correlations of EMT-related genes to prognosis and tumor-infiltrating lymphocytes in different cancers remain unclear. TCGA, GEO databases were used to analyze the expression, prognosis, and immune infiltration of EMT markers in cancer. RT-qPCR, immunohistochemistry, and western blot were used to analysis the expression and prognosis of SNAI1 in gastrointestinal cancers. High SNAI1 expression was closely related with poorer overall survival in gastrointestinal cancers in TCGA cohort. High SNAI1 expression was closely related with poorer overall survival in gastrointestinal cancers, and was validated in GEO database. Simultaneously, high expression of SNAI1 correlates with clinical relevance of gastric cancer. Moreover, SNAI1 expression was associated with tumor-infiltrating immune cells in gastrointestinal cancers. In addition, RT-qPCR, immunohistochemistry, and western blot showed SNAI1 expression was higher in gastrointestinal cancers compared to the normal tissues. Finally, high SNAI1 expression was closely related with poorer overall survival and correlates with clinical relevance of gastrointestinal cancers in an independent validation cohort. In summary, the results approaches to suggest that SNAI1 can be used as a prognostic biomarker for determining prognosis and immune infiltration in gastrointestinal cancers. Impact Journals 2020-08-21 /pmc/articles/PMC7521489/ /pubmed/32833672 http://dx.doi.org/10.18632/aging.103667 Text en Copyright: © 2020 Fang and Ding. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Fang, Jiaying
Ding, Zan
SNAI1 is a prognostic biomarker and correlated with immune infiltrates in gastrointestinal cancers
title SNAI1 is a prognostic biomarker and correlated with immune infiltrates in gastrointestinal cancers
title_full SNAI1 is a prognostic biomarker and correlated with immune infiltrates in gastrointestinal cancers
title_fullStr SNAI1 is a prognostic biomarker and correlated with immune infiltrates in gastrointestinal cancers
title_full_unstemmed SNAI1 is a prognostic biomarker and correlated with immune infiltrates in gastrointestinal cancers
title_short SNAI1 is a prognostic biomarker and correlated with immune infiltrates in gastrointestinal cancers
title_sort snai1 is a prognostic biomarker and correlated with immune infiltrates in gastrointestinal cancers
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7521489/
https://www.ncbi.nlm.nih.gov/pubmed/32833672
http://dx.doi.org/10.18632/aging.103667
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