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Density-based classification in diabetic retinopathy through thickness of retinal layers from optical coherence tomography

Diabetic retinopathy (DR) is a severe retinal disorder that can lead to vision loss, however, its underlying mechanism has not been fully understood. Previous studies have taken advantage of Optical Coherence Tomography (OCT) and shown that the thickness of individual retinal layers are affected in...

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Autores principales: Mohammed, Shariq, Li, Tingyang, Chen, Xing D., Warner, Elisa, Shankar, Anand, Abalem, Maria Fernanda, Jayasundera, Thiran, Gardner, Thomas W., Rao, Arvind
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7522225/
https://www.ncbi.nlm.nih.gov/pubmed/32985536
http://dx.doi.org/10.1038/s41598-020-72813-x
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author Mohammed, Shariq
Li, Tingyang
Chen, Xing D.
Warner, Elisa
Shankar, Anand
Abalem, Maria Fernanda
Jayasundera, Thiran
Gardner, Thomas W.
Rao, Arvind
author_facet Mohammed, Shariq
Li, Tingyang
Chen, Xing D.
Warner, Elisa
Shankar, Anand
Abalem, Maria Fernanda
Jayasundera, Thiran
Gardner, Thomas W.
Rao, Arvind
author_sort Mohammed, Shariq
collection PubMed
description Diabetic retinopathy (DR) is a severe retinal disorder that can lead to vision loss, however, its underlying mechanism has not been fully understood. Previous studies have taken advantage of Optical Coherence Tomography (OCT) and shown that the thickness of individual retinal layers are affected in patients with DR. However, most studies analyzed the thickness by calculating summary statistics from retinal thickness maps of the macula region. This study aims to apply a density function-based statistical framework to the thickness data obtained through OCT, and to compare the predictive power of various retinal layers to assess the severity of DR. We used a prototype data set of 107 subjects which are comprised of 38 non-proliferative DR (NPDR), 28 without DR (NoDR), and 41 controls. Based on the thickness profiles, we constructed novel features which capture the variation in the distribution of the pixel-wise retinal layer thicknesses from OCT. We quantified the predictive power of each of the retinal layers to distinguish between all three pairwise comparisons of the severity in DR (NoDR vs NPDR, controls vs NPDR, and controls vs NoDR). When applied to this preliminary DR data set, our density-based method demonstrated better predictive results compared with simple summary statistics. Furthermore, our results indicate considerable differences in retinal layer structuring based on the severity of DR. We found that: (a) the outer plexiform layer is the most discriminative layer for classifying NoDR vs NPDR; (b) the outer plexiform, inner nuclear and ganglion cell layers are the strongest biomarkers for discriminating controls from NPDR; and (c) the inner nuclear layer distinguishes best between controls and NoDR.
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spelling pubmed-75222252020-09-29 Density-based classification in diabetic retinopathy through thickness of retinal layers from optical coherence tomography Mohammed, Shariq Li, Tingyang Chen, Xing D. Warner, Elisa Shankar, Anand Abalem, Maria Fernanda Jayasundera, Thiran Gardner, Thomas W. Rao, Arvind Sci Rep Article Diabetic retinopathy (DR) is a severe retinal disorder that can lead to vision loss, however, its underlying mechanism has not been fully understood. Previous studies have taken advantage of Optical Coherence Tomography (OCT) and shown that the thickness of individual retinal layers are affected in patients with DR. However, most studies analyzed the thickness by calculating summary statistics from retinal thickness maps of the macula region. This study aims to apply a density function-based statistical framework to the thickness data obtained through OCT, and to compare the predictive power of various retinal layers to assess the severity of DR. We used a prototype data set of 107 subjects which are comprised of 38 non-proliferative DR (NPDR), 28 without DR (NoDR), and 41 controls. Based on the thickness profiles, we constructed novel features which capture the variation in the distribution of the pixel-wise retinal layer thicknesses from OCT. We quantified the predictive power of each of the retinal layers to distinguish between all three pairwise comparisons of the severity in DR (NoDR vs NPDR, controls vs NPDR, and controls vs NoDR). When applied to this preliminary DR data set, our density-based method demonstrated better predictive results compared with simple summary statistics. Furthermore, our results indicate considerable differences in retinal layer structuring based on the severity of DR. We found that: (a) the outer plexiform layer is the most discriminative layer for classifying NoDR vs NPDR; (b) the outer plexiform, inner nuclear and ganglion cell layers are the strongest biomarkers for discriminating controls from NPDR; and (c) the inner nuclear layer distinguishes best between controls and NoDR. Nature Publishing Group UK 2020-09-28 /pmc/articles/PMC7522225/ /pubmed/32985536 http://dx.doi.org/10.1038/s41598-020-72813-x Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Mohammed, Shariq
Li, Tingyang
Chen, Xing D.
Warner, Elisa
Shankar, Anand
Abalem, Maria Fernanda
Jayasundera, Thiran
Gardner, Thomas W.
Rao, Arvind
Density-based classification in diabetic retinopathy through thickness of retinal layers from optical coherence tomography
title Density-based classification in diabetic retinopathy through thickness of retinal layers from optical coherence tomography
title_full Density-based classification in diabetic retinopathy through thickness of retinal layers from optical coherence tomography
title_fullStr Density-based classification in diabetic retinopathy through thickness of retinal layers from optical coherence tomography
title_full_unstemmed Density-based classification in diabetic retinopathy through thickness of retinal layers from optical coherence tomography
title_short Density-based classification in diabetic retinopathy through thickness of retinal layers from optical coherence tomography
title_sort density-based classification in diabetic retinopathy through thickness of retinal layers from optical coherence tomography
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7522225/
https://www.ncbi.nlm.nih.gov/pubmed/32985536
http://dx.doi.org/10.1038/s41598-020-72813-x
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