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Modeling the Reaction of Carboxylic Acids and Isonitriles in a Self‐Assembled Capsule

Quantum chemical calculations were used to study the reaction of carboxylic acids with isonitriles inside a resorcinarene‐based self‐assembled capsule. Experimentally, it has been shown that the reactions between p‐tolylacetic acid and n‐butyl isonitrile or isopropyl isonitrile behave differently in...

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Autores principales: Daver, Henrik, Rebek, Julius, Himo, Fahmi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7522688/
https://www.ncbi.nlm.nih.gov/pubmed/32428333
http://dx.doi.org/10.1002/chem.202001735
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author Daver, Henrik
Rebek, Julius
Himo, Fahmi
author_facet Daver, Henrik
Rebek, Julius
Himo, Fahmi
author_sort Daver, Henrik
collection PubMed
description Quantum chemical calculations were used to study the reaction of carboxylic acids with isonitriles inside a resorcinarene‐based self‐assembled capsule. Experimentally, it has been shown that the reactions between p‐tolylacetic acid and n‐butyl isonitrile or isopropyl isonitrile behave differently in the presence of the capsule compared both with each other and also with their solution counterparts. Herein, the reasons for these divergent behaviors are addressed by comparing the detailed energy profiles for the reactions of the two isonitriles inside and outside the capsule. An energy decomposition analysis was conducted to quantify the different factors affecting the reactivity. The calculations reproduce the experimental findings very well. Thus, encapsulation leads to lowering of the energy barrier for the first step of the reaction, the concerted α‐addition and proton transfer, which in solution is rate‐determining, and this explains the rate acceleration observed in the presence of the capsule. The barrier for the final step of the reaction, the 1,3 O→N acyl transfer, is calculated to be higher with the isopropyl substituent inside the capsule compared with n‐butyl. With the isopropyl substituent, the transition state and the product of this step are significantly shorter than the preceding intermediate, and this results in energetically unfavorable empty spaces inside the capsule, which cause a higher barrier. With the n‐butyl substituent, on the other hand, the carbon chain can untwine and hence uphold an appropriate guest length.
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spelling pubmed-75226882020-10-02 Modeling the Reaction of Carboxylic Acids and Isonitriles in a Self‐Assembled Capsule Daver, Henrik Rebek, Julius Himo, Fahmi Chemistry Full Papers Quantum chemical calculations were used to study the reaction of carboxylic acids with isonitriles inside a resorcinarene‐based self‐assembled capsule. Experimentally, it has been shown that the reactions between p‐tolylacetic acid and n‐butyl isonitrile or isopropyl isonitrile behave differently in the presence of the capsule compared both with each other and also with their solution counterparts. Herein, the reasons for these divergent behaviors are addressed by comparing the detailed energy profiles for the reactions of the two isonitriles inside and outside the capsule. An energy decomposition analysis was conducted to quantify the different factors affecting the reactivity. The calculations reproduce the experimental findings very well. Thus, encapsulation leads to lowering of the energy barrier for the first step of the reaction, the concerted α‐addition and proton transfer, which in solution is rate‐determining, and this explains the rate acceleration observed in the presence of the capsule. The barrier for the final step of the reaction, the 1,3 O→N acyl transfer, is calculated to be higher with the isopropyl substituent inside the capsule compared with n‐butyl. With the isopropyl substituent, the transition state and the product of this step are significantly shorter than the preceding intermediate, and this results in energetically unfavorable empty spaces inside the capsule, which cause a higher barrier. With the n‐butyl substituent, on the other hand, the carbon chain can untwine and hence uphold an appropriate guest length. John Wiley and Sons Inc. 2020-07-22 2020-08-21 /pmc/articles/PMC7522688/ /pubmed/32428333 http://dx.doi.org/10.1002/chem.202001735 Text en © 2020 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Full Papers
Daver, Henrik
Rebek, Julius
Himo, Fahmi
Modeling the Reaction of Carboxylic Acids and Isonitriles in a Self‐Assembled Capsule
title Modeling the Reaction of Carboxylic Acids and Isonitriles in a Self‐Assembled Capsule
title_full Modeling the Reaction of Carboxylic Acids and Isonitriles in a Self‐Assembled Capsule
title_fullStr Modeling the Reaction of Carboxylic Acids and Isonitriles in a Self‐Assembled Capsule
title_full_unstemmed Modeling the Reaction of Carboxylic Acids and Isonitriles in a Self‐Assembled Capsule
title_short Modeling the Reaction of Carboxylic Acids and Isonitriles in a Self‐Assembled Capsule
title_sort modeling the reaction of carboxylic acids and isonitriles in a self‐assembled capsule
topic Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7522688/
https://www.ncbi.nlm.nih.gov/pubmed/32428333
http://dx.doi.org/10.1002/chem.202001735
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