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Isolation and molecular characterization of Fowl adenovirus strains in Black grouse: First reported case in Poland
This article describes the isolation, molecular characterization, and genotyping of two fowl adenovirus (FAdVs) strains with GenBank Accession numbers (MT478054, JSN-G033-18-L and MT478055, JSN-G033-18-B) obtained from the internal organs of black grouse (Lyrurus tetrix). This study also reveals the...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7523988/ https://www.ncbi.nlm.nih.gov/pubmed/32991587 http://dx.doi.org/10.1371/journal.pone.0234532 |
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author | Niczyporuk, Jowita Samanta Kozdrun, Wojciech Czekaj, Hanna Piekarska, Karolina Stys-Fijoł, Natalia |
author_facet | Niczyporuk, Jowita Samanta Kozdrun, Wojciech Czekaj, Hanna Piekarska, Karolina Stys-Fijoł, Natalia |
author_sort | Niczyporuk, Jowita Samanta |
collection | PubMed |
description | This article describes the isolation, molecular characterization, and genotyping of two fowl adenovirus (FAdVs) strains with GenBank Accession numbers (MT478054, JSN-G033-18-L and MT478055, JSN-G033-18-B) obtained from the internal organs of black grouse (Lyrurus tetrix). This study also reveals the first confirmation of fowl adenovirus in Poland, supporting one of the hypotheses about the probability of fowl adenovirus interspecies transmission. The adenovirus strain sequences were investigated via phylogenetic analysis and were found to have an overall mean pairwise distance of 2.189. The heterogeneity, Relative Synonymous Codon Usage (RSCU), codon composition, and nucleotide frequencies were examined. Statistical analyses and Tajima’s test for the examined sequences were carried out. The Maximum Likelihood for the examined sequences substitutions was performed. The results of the sequence analysis identified MT478054, JSN-G033-18-L and MT478055, JSN-G033-18-B as strains of fowl adenovirus 2/11/D, with the Fowl adenovirus D complete sequence showing a 93% match. Wild birds may act as a natural reservoir for FAdVs and likely play an important role in the spreading of these viruses in the environment. The findings reported here suggest horizontal transmission within and between avian species. |
format | Online Article Text |
id | pubmed-7523988 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-75239882020-10-06 Isolation and molecular characterization of Fowl adenovirus strains in Black grouse: First reported case in Poland Niczyporuk, Jowita Samanta Kozdrun, Wojciech Czekaj, Hanna Piekarska, Karolina Stys-Fijoł, Natalia PLoS One Research Article This article describes the isolation, molecular characterization, and genotyping of two fowl adenovirus (FAdVs) strains with GenBank Accession numbers (MT478054, JSN-G033-18-L and MT478055, JSN-G033-18-B) obtained from the internal organs of black grouse (Lyrurus tetrix). This study also reveals the first confirmation of fowl adenovirus in Poland, supporting one of the hypotheses about the probability of fowl adenovirus interspecies transmission. The adenovirus strain sequences were investigated via phylogenetic analysis and were found to have an overall mean pairwise distance of 2.189. The heterogeneity, Relative Synonymous Codon Usage (RSCU), codon composition, and nucleotide frequencies were examined. Statistical analyses and Tajima’s test for the examined sequences were carried out. The Maximum Likelihood for the examined sequences substitutions was performed. The results of the sequence analysis identified MT478054, JSN-G033-18-L and MT478055, JSN-G033-18-B as strains of fowl adenovirus 2/11/D, with the Fowl adenovirus D complete sequence showing a 93% match. Wild birds may act as a natural reservoir for FAdVs and likely play an important role in the spreading of these viruses in the environment. The findings reported here suggest horizontal transmission within and between avian species. Public Library of Science 2020-09-29 /pmc/articles/PMC7523988/ /pubmed/32991587 http://dx.doi.org/10.1371/journal.pone.0234532 Text en © 2020 Niczyporuk et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Niczyporuk, Jowita Samanta Kozdrun, Wojciech Czekaj, Hanna Piekarska, Karolina Stys-Fijoł, Natalia Isolation and molecular characterization of Fowl adenovirus strains in Black grouse: First reported case in Poland |
title | Isolation and molecular characterization of Fowl adenovirus strains in Black grouse: First reported case in Poland |
title_full | Isolation and molecular characterization of Fowl adenovirus strains in Black grouse: First reported case in Poland |
title_fullStr | Isolation and molecular characterization of Fowl adenovirus strains in Black grouse: First reported case in Poland |
title_full_unstemmed | Isolation and molecular characterization of Fowl adenovirus strains in Black grouse: First reported case in Poland |
title_short | Isolation and molecular characterization of Fowl adenovirus strains in Black grouse: First reported case in Poland |
title_sort | isolation and molecular characterization of fowl adenovirus strains in black grouse: first reported case in poland |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7523988/ https://www.ncbi.nlm.nih.gov/pubmed/32991587 http://dx.doi.org/10.1371/journal.pone.0234532 |
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