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Performance of a deep learning based neural network in the selection of human blastocysts for implantation

Deep learning in in vitro fertilization is currently being evaluated in the development of assistive tools for the determination of transfer order and implantation potential using time-lapse data collected through expensive imaging hardware. Assistive tools and algorithms that can work with static i...

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Autores principales: Bormann, Charles L, Kanakasabapathy, Manoj Kumar, Thirumalaraju, Prudhvi, Gupta, Raghav, Pooniwala, Rohan, Kandula, Hemanth, Hariton, Eduardo, Souter, Irene, Dimitriadis, Irene, Ramirez, Leslie B, Curchoe, Carol L, Swain, Jason, Boehnlein, Lynn M, Shafiee, Hadi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7527234/
https://www.ncbi.nlm.nih.gov/pubmed/32930094
http://dx.doi.org/10.7554/eLife.55301
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author Bormann, Charles L
Kanakasabapathy, Manoj Kumar
Thirumalaraju, Prudhvi
Gupta, Raghav
Pooniwala, Rohan
Kandula, Hemanth
Hariton, Eduardo
Souter, Irene
Dimitriadis, Irene
Ramirez, Leslie B
Curchoe, Carol L
Swain, Jason
Boehnlein, Lynn M
Shafiee, Hadi
author_facet Bormann, Charles L
Kanakasabapathy, Manoj Kumar
Thirumalaraju, Prudhvi
Gupta, Raghav
Pooniwala, Rohan
Kandula, Hemanth
Hariton, Eduardo
Souter, Irene
Dimitriadis, Irene
Ramirez, Leslie B
Curchoe, Carol L
Swain, Jason
Boehnlein, Lynn M
Shafiee, Hadi
author_sort Bormann, Charles L
collection PubMed
description Deep learning in in vitro fertilization is currently being evaluated in the development of assistive tools for the determination of transfer order and implantation potential using time-lapse data collected through expensive imaging hardware. Assistive tools and algorithms that can work with static images, however, can help in improving the access to care by enabling their use with images acquired from traditional microscopes that are available to virtually all fertility centers. Here, we evaluated the use of a deep convolutional neural network (CNN), trained using single timepoint images of embryos collected at 113 hr post-insemination, in embryo selection amongst 97 clinical patient cohorts (742 embryos) and observed an accuracy of 90% in choosing the highest quality embryo available. Furthermore, a CNN trained to assess an embryo’s implantation potential directly using a set of 97 euploid embryos capable of implantation outperformed 15 trained embryologists (75.26% vs. 67.35%, p<0.0001) from five different fertility centers.
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spelling pubmed-75272342020-10-01 Performance of a deep learning based neural network in the selection of human blastocysts for implantation Bormann, Charles L Kanakasabapathy, Manoj Kumar Thirumalaraju, Prudhvi Gupta, Raghav Pooniwala, Rohan Kandula, Hemanth Hariton, Eduardo Souter, Irene Dimitriadis, Irene Ramirez, Leslie B Curchoe, Carol L Swain, Jason Boehnlein, Lynn M Shafiee, Hadi eLife Medicine Deep learning in in vitro fertilization is currently being evaluated in the development of assistive tools for the determination of transfer order and implantation potential using time-lapse data collected through expensive imaging hardware. Assistive tools and algorithms that can work with static images, however, can help in improving the access to care by enabling their use with images acquired from traditional microscopes that are available to virtually all fertility centers. Here, we evaluated the use of a deep convolutional neural network (CNN), trained using single timepoint images of embryos collected at 113 hr post-insemination, in embryo selection amongst 97 clinical patient cohorts (742 embryos) and observed an accuracy of 90% in choosing the highest quality embryo available. Furthermore, a CNN trained to assess an embryo’s implantation potential directly using a set of 97 euploid embryos capable of implantation outperformed 15 trained embryologists (75.26% vs. 67.35%, p<0.0001) from five different fertility centers. eLife Sciences Publications, Ltd 2020-09-15 /pmc/articles/PMC7527234/ /pubmed/32930094 http://dx.doi.org/10.7554/eLife.55301 Text en © 2020, Bormann et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Medicine
Bormann, Charles L
Kanakasabapathy, Manoj Kumar
Thirumalaraju, Prudhvi
Gupta, Raghav
Pooniwala, Rohan
Kandula, Hemanth
Hariton, Eduardo
Souter, Irene
Dimitriadis, Irene
Ramirez, Leslie B
Curchoe, Carol L
Swain, Jason
Boehnlein, Lynn M
Shafiee, Hadi
Performance of a deep learning based neural network in the selection of human blastocysts for implantation
title Performance of a deep learning based neural network in the selection of human blastocysts for implantation
title_full Performance of a deep learning based neural network in the selection of human blastocysts for implantation
title_fullStr Performance of a deep learning based neural network in the selection of human blastocysts for implantation
title_full_unstemmed Performance of a deep learning based neural network in the selection of human blastocysts for implantation
title_short Performance of a deep learning based neural network in the selection of human blastocysts for implantation
title_sort performance of a deep learning based neural network in the selection of human blastocysts for implantation
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7527234/
https://www.ncbi.nlm.nih.gov/pubmed/32930094
http://dx.doi.org/10.7554/eLife.55301
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