Cargando…
Urine metabolomics based prediction model approach for radiation exposure
The radiological incidents and terrorism have demanded the need for the development of rapid, precise, and non-invasive technique for detection and quantification of exposed dose of radiation. Though radiation induced metabolic markers have been thoroughly investigated, but reproducibility still nee...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7527994/ https://www.ncbi.nlm.nih.gov/pubmed/32999294 http://dx.doi.org/10.1038/s41598-020-72426-4 |
_version_ | 1783589171148881920 |
---|---|
author | Tyagi, Ritu Maan, Kiran Khushu, Subash Rana, Poonam |
author_facet | Tyagi, Ritu Maan, Kiran Khushu, Subash Rana, Poonam |
author_sort | Tyagi, Ritu |
collection | PubMed |
description | The radiological incidents and terrorism have demanded the need for the development of rapid, precise, and non-invasive technique for detection and quantification of exposed dose of radiation. Though radiation induced metabolic markers have been thoroughly investigated, but reproducibility still needs to be elucidated. The present study aims at assessing the reliability and reproducibility of markers using nuclear magnetic resonance (NMR) spectroscopy and further deriving a logistic regression model based on these markers. C57BL/6 male mice (8–10 weeks) whole body γ-irradiated and sham irradiated controls were used. Urine samples collected at 24 h post dose were investigated using high resolution NMR spectroscopy and the datasets were analyzed using multivariate analysis. Fifteen distinguishable metabolites and 3 metabolic pathways (TCA cycle, taurine and hypotaurine metabolism, primary bile acid biosynthesis) were found to be amended. ROC curve and logistic regression was used to establish a diagnostic model as Logit (p) = log (p/1 − p) = −0.498 + 13.771 (tau) − 3.412 (citrate) − 34.461 (α-KG) + 515.183 (fumarate) with a sensitivity and specificity of 1.00 and 0.964 respectively. The findings demonstrate the proof of concept and the potential of NMR based metabolomics to establish a prediction model that can be implemented as a promising mass screening tool during triage. |
format | Online Article Text |
id | pubmed-7527994 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-75279942020-10-02 Urine metabolomics based prediction model approach for radiation exposure Tyagi, Ritu Maan, Kiran Khushu, Subash Rana, Poonam Sci Rep Article The radiological incidents and terrorism have demanded the need for the development of rapid, precise, and non-invasive technique for detection and quantification of exposed dose of radiation. Though radiation induced metabolic markers have been thoroughly investigated, but reproducibility still needs to be elucidated. The present study aims at assessing the reliability and reproducibility of markers using nuclear magnetic resonance (NMR) spectroscopy and further deriving a logistic regression model based on these markers. C57BL/6 male mice (8–10 weeks) whole body γ-irradiated and sham irradiated controls were used. Urine samples collected at 24 h post dose were investigated using high resolution NMR spectroscopy and the datasets were analyzed using multivariate analysis. Fifteen distinguishable metabolites and 3 metabolic pathways (TCA cycle, taurine and hypotaurine metabolism, primary bile acid biosynthesis) were found to be amended. ROC curve and logistic regression was used to establish a diagnostic model as Logit (p) = log (p/1 − p) = −0.498 + 13.771 (tau) − 3.412 (citrate) − 34.461 (α-KG) + 515.183 (fumarate) with a sensitivity and specificity of 1.00 and 0.964 respectively. The findings demonstrate the proof of concept and the potential of NMR based metabolomics to establish a prediction model that can be implemented as a promising mass screening tool during triage. Nature Publishing Group UK 2020-09-30 /pmc/articles/PMC7527994/ /pubmed/32999294 http://dx.doi.org/10.1038/s41598-020-72426-4 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Tyagi, Ritu Maan, Kiran Khushu, Subash Rana, Poonam Urine metabolomics based prediction model approach for radiation exposure |
title | Urine metabolomics based prediction model approach for radiation exposure |
title_full | Urine metabolomics based prediction model approach for radiation exposure |
title_fullStr | Urine metabolomics based prediction model approach for radiation exposure |
title_full_unstemmed | Urine metabolomics based prediction model approach for radiation exposure |
title_short | Urine metabolomics based prediction model approach for radiation exposure |
title_sort | urine metabolomics based prediction model approach for radiation exposure |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7527994/ https://www.ncbi.nlm.nih.gov/pubmed/32999294 http://dx.doi.org/10.1038/s41598-020-72426-4 |
work_keys_str_mv | AT tyagiritu urinemetabolomicsbasedpredictionmodelapproachforradiationexposure AT maankiran urinemetabolomicsbasedpredictionmodelapproachforradiationexposure AT khushusubash urinemetabolomicsbasedpredictionmodelapproachforradiationexposure AT ranapoonam urinemetabolomicsbasedpredictionmodelapproachforradiationexposure |