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Early Prediction of Cognitive Deficit in Very Preterm Infants Using Brain Structural Connectome With Transfer Learning Enhanced Deep Convolutional Neural Networks

Up to 40% of very preterm infants (≤32 weeks’ gestational age) were identified with a cognitive deficit at 2 years of age. Yet, accurate clinical diagnosis of cognitive deficit cannot be made until early childhood around 3–5 years of age. Recently, brain structural connectome that was constructed by...

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Autores principales: Chen, Ming, Li, Hailong, Wang, Jinghua, Yuan, Weihong, Altaye, Mekbib, Parikh, Nehal A., He, Lili
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7530168/
https://www.ncbi.nlm.nih.gov/pubmed/33041749
http://dx.doi.org/10.3389/fnins.2020.00858
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author Chen, Ming
Li, Hailong
Wang, Jinghua
Yuan, Weihong
Altaye, Mekbib
Parikh, Nehal A.
He, Lili
author_facet Chen, Ming
Li, Hailong
Wang, Jinghua
Yuan, Weihong
Altaye, Mekbib
Parikh, Nehal A.
He, Lili
author_sort Chen, Ming
collection PubMed
description Up to 40% of very preterm infants (≤32 weeks’ gestational age) were identified with a cognitive deficit at 2 years of age. Yet, accurate clinical diagnosis of cognitive deficit cannot be made until early childhood around 3–5 years of age. Recently, brain structural connectome that was constructed by advanced diffusion tensor imaging (DTI) technique has been playing an important role in understanding human cognitive functions. However, available annotated neuroimaging datasets with clinical and outcome information are usually limited and expensive to enlarge in the very preterm infants’ studies. These challenges hinder the development of neonatal prognostic tools for early prediction of cognitive deficit in very preterm infants. In this study, we considered the brain structural connectome as a 2D image and applied established deep convolutional neural networks to learn the spatial and topological information of the brain connectome. Furthermore, the transfer learning technique was utilized to mitigate the issue of insufficient training data. As such, we developed a transfer learning enhanced convolutional neural network (TL-CNN) model for early prediction of cognitive assessment at 2 years of age in very preterm infants using brain structural connectome. A total of 110 very preterm infants were enrolled in this work. Brain structural connectome was constructed using DTI images scanned at term-equivalent age. Bayley III cognitive assessments were conducted at 2 years of corrected age. We applied the proposed model to both cognitive deficit classification and continuous cognitive score prediction tasks. The results demonstrated that TL-CNN achieved improved performance compared to multiple peer models. Finally, we identified the brain regions most discriminative to the cognitive deficit. The results suggest that deep learning models may facilitate early prediction of later neurodevelopmental outcomes in very preterm infants at term-equivalent age.
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spelling pubmed-75301682020-10-09 Early Prediction of Cognitive Deficit in Very Preterm Infants Using Brain Structural Connectome With Transfer Learning Enhanced Deep Convolutional Neural Networks Chen, Ming Li, Hailong Wang, Jinghua Yuan, Weihong Altaye, Mekbib Parikh, Nehal A. He, Lili Front Neurosci Neuroscience Up to 40% of very preterm infants (≤32 weeks’ gestational age) were identified with a cognitive deficit at 2 years of age. Yet, accurate clinical diagnosis of cognitive deficit cannot be made until early childhood around 3–5 years of age. Recently, brain structural connectome that was constructed by advanced diffusion tensor imaging (DTI) technique has been playing an important role in understanding human cognitive functions. However, available annotated neuroimaging datasets with clinical and outcome information are usually limited and expensive to enlarge in the very preterm infants’ studies. These challenges hinder the development of neonatal prognostic tools for early prediction of cognitive deficit in very preterm infants. In this study, we considered the brain structural connectome as a 2D image and applied established deep convolutional neural networks to learn the spatial and topological information of the brain connectome. Furthermore, the transfer learning technique was utilized to mitigate the issue of insufficient training data. As such, we developed a transfer learning enhanced convolutional neural network (TL-CNN) model for early prediction of cognitive assessment at 2 years of age in very preterm infants using brain structural connectome. A total of 110 very preterm infants were enrolled in this work. Brain structural connectome was constructed using DTI images scanned at term-equivalent age. Bayley III cognitive assessments were conducted at 2 years of corrected age. We applied the proposed model to both cognitive deficit classification and continuous cognitive score prediction tasks. The results demonstrated that TL-CNN achieved improved performance compared to multiple peer models. Finally, we identified the brain regions most discriminative to the cognitive deficit. The results suggest that deep learning models may facilitate early prediction of later neurodevelopmental outcomes in very preterm infants at term-equivalent age. Frontiers Media S.A. 2020-09-18 /pmc/articles/PMC7530168/ /pubmed/33041749 http://dx.doi.org/10.3389/fnins.2020.00858 Text en Copyright © 2020 Chen, Li, Wang, Yuan, Altaye, Parikh and He. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Chen, Ming
Li, Hailong
Wang, Jinghua
Yuan, Weihong
Altaye, Mekbib
Parikh, Nehal A.
He, Lili
Early Prediction of Cognitive Deficit in Very Preterm Infants Using Brain Structural Connectome With Transfer Learning Enhanced Deep Convolutional Neural Networks
title Early Prediction of Cognitive Deficit in Very Preterm Infants Using Brain Structural Connectome With Transfer Learning Enhanced Deep Convolutional Neural Networks
title_full Early Prediction of Cognitive Deficit in Very Preterm Infants Using Brain Structural Connectome With Transfer Learning Enhanced Deep Convolutional Neural Networks
title_fullStr Early Prediction of Cognitive Deficit in Very Preterm Infants Using Brain Structural Connectome With Transfer Learning Enhanced Deep Convolutional Neural Networks
title_full_unstemmed Early Prediction of Cognitive Deficit in Very Preterm Infants Using Brain Structural Connectome With Transfer Learning Enhanced Deep Convolutional Neural Networks
title_short Early Prediction of Cognitive Deficit in Very Preterm Infants Using Brain Structural Connectome With Transfer Learning Enhanced Deep Convolutional Neural Networks
title_sort early prediction of cognitive deficit in very preterm infants using brain structural connectome with transfer learning enhanced deep convolutional neural networks
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7530168/
https://www.ncbi.nlm.nih.gov/pubmed/33041749
http://dx.doi.org/10.3389/fnins.2020.00858
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