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Laboratory surveillance for SARS-CoV-2 in India: Performance of testing & descriptive epidemiology of detected COVID-19, January 22 - April 30, 2020

BACKGROUND & OBJECTIVES: India has been reporting the cases of coronavirus disease 2019 (COVID-19) since January 30, 2020. The Indian Council of Medical Research (ICMR) formulated and established laboratory surveillance for COVID-19. In this study, an analysis of the surveillance data was done t...

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Autores principales: Abraham, Priya, Aggarwal, Neeraj, Babu, Giridhara R., Barani, Suganya, Bhargava, Balram, Bhatnagar, Tarun, Dhama, Ajay Singh, Gangakhedkar, Raman R., Giri, Sidhartha, Gupta, Nivedita, Kurup, Karishma K., Manickam, Ponnaiah, Murhekar, Manoj, Potdar, Varsha, Praharaj, Ira, Rade, Kiran, Reddy, D.C.S., Saravanakumar, V., Shah, Naman, Singh, Harpreet, Thangaraj, Jeromie Wesley Vivian, Yadav, Naveen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer - Medknow 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7530445/
https://www.ncbi.nlm.nih.gov/pubmed/32611914
http://dx.doi.org/10.4103/ijmr.IJMR_1896_20
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author Abraham, Priya
Aggarwal, Neeraj
Babu, Giridhara R.
Barani, Suganya
Bhargava, Balram
Bhatnagar, Tarun
Dhama, Ajay Singh
Gangakhedkar, Raman R.
Giri, Sidhartha
Gupta, Nivedita
Kurup, Karishma K.
Manickam, Ponnaiah
Murhekar, Manoj
Potdar, Varsha
Praharaj, Ira
Rade, Kiran
Reddy, D.C.S.
Saravanakumar, V.
Shah, Naman
Singh, Harpreet
Thangaraj, Jeromie Wesley Vivian
Yadav, Naveen
author_facet Abraham, Priya
Aggarwal, Neeraj
Babu, Giridhara R.
Barani, Suganya
Bhargava, Balram
Bhatnagar, Tarun
Dhama, Ajay Singh
Gangakhedkar, Raman R.
Giri, Sidhartha
Gupta, Nivedita
Kurup, Karishma K.
Manickam, Ponnaiah
Murhekar, Manoj
Potdar, Varsha
Praharaj, Ira
Rade, Kiran
Reddy, D.C.S.
Saravanakumar, V.
Shah, Naman
Singh, Harpreet
Thangaraj, Jeromie Wesley Vivian
Yadav, Naveen
collection PubMed
description BACKGROUND & OBJECTIVES: India has been reporting the cases of coronavirus disease 2019 (COVID-19) since January 30, 2020. The Indian Council of Medical Research (ICMR) formulated and established laboratory surveillance for COVID-19. In this study, an analysis of the surveillance data was done to describe the testing performance and descriptive epidemiology of COVID-19 cases by time, place and person. METHODS: The data were extracted from January 22 to April 30, 2020. The frequencies of testing performance were described over time and by place. We described cases by time (epidemic curve by date of specimen collection; seven-day moving average), place (area map) and person (attack rate by age, sex and contact status), and trends were represented along with public health measures and events. RESULTS: Between January 22 and April 30, 2020, a total of 1,021,518 individuals were tested for severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2). Testing increased from about 250 individuals per day in the beginning of March to 50,000 specimens per day by the end of April 2020. Overall, 40,184 (3.9%) tests were reported positive. The proportion of positive cases was highest among symptomatic and asymptomatic contacts, 2-3-fold higher than among those with severe acute respiratory infection, or those with an international travel history or healthcare workers. The attack rate (per million) by age was highest among those aged 50-69 yr (63.3) and was lowest among those under 10 yr (6.1). The attack rate was higher among males (41.6) than females (24.3). The secondary attack rate was 6.0 per cent. Overall, 99.0 per cent of 736 districts reported testing and 71.1 per cent reported COVID-19 cases. INTERPRETATION & CONCLUSIONS: The coverage and frequency of ICMR's laboratory surveillance for SARS-CoV-2 improved over time. COVID-19 was reported from most parts of India, and the attack rate was more among men and the elderly and common among close contacts. Analysis of the data indicates that for further insight, additional surveillance tools and strategies at the national and sub-national levels are needed.
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spelling pubmed-75304452020-10-13 Laboratory surveillance for SARS-CoV-2 in India: Performance of testing & descriptive epidemiology of detected COVID-19, January 22 - April 30, 2020 Abraham, Priya Aggarwal, Neeraj Babu, Giridhara R. Barani, Suganya Bhargava, Balram Bhatnagar, Tarun Dhama, Ajay Singh Gangakhedkar, Raman R. Giri, Sidhartha Gupta, Nivedita Kurup, Karishma K. Manickam, Ponnaiah Murhekar, Manoj Potdar, Varsha Praharaj, Ira Rade, Kiran Reddy, D.C.S. Saravanakumar, V. Shah, Naman Singh, Harpreet Thangaraj, Jeromie Wesley Vivian Yadav, Naveen Indian J Med Res Original Article BACKGROUND & OBJECTIVES: India has been reporting the cases of coronavirus disease 2019 (COVID-19) since January 30, 2020. The Indian Council of Medical Research (ICMR) formulated and established laboratory surveillance for COVID-19. In this study, an analysis of the surveillance data was done to describe the testing performance and descriptive epidemiology of COVID-19 cases by time, place and person. METHODS: The data were extracted from January 22 to April 30, 2020. The frequencies of testing performance were described over time and by place. We described cases by time (epidemic curve by date of specimen collection; seven-day moving average), place (area map) and person (attack rate by age, sex and contact status), and trends were represented along with public health measures and events. RESULTS: Between January 22 and April 30, 2020, a total of 1,021,518 individuals were tested for severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2). Testing increased from about 250 individuals per day in the beginning of March to 50,000 specimens per day by the end of April 2020. Overall, 40,184 (3.9%) tests were reported positive. The proportion of positive cases was highest among symptomatic and asymptomatic contacts, 2-3-fold higher than among those with severe acute respiratory infection, or those with an international travel history or healthcare workers. The attack rate (per million) by age was highest among those aged 50-69 yr (63.3) and was lowest among those under 10 yr (6.1). The attack rate was higher among males (41.6) than females (24.3). The secondary attack rate was 6.0 per cent. Overall, 99.0 per cent of 736 districts reported testing and 71.1 per cent reported COVID-19 cases. INTERPRETATION & CONCLUSIONS: The coverage and frequency of ICMR's laboratory surveillance for SARS-CoV-2 improved over time. COVID-19 was reported from most parts of India, and the attack rate was more among men and the elderly and common among close contacts. Analysis of the data indicates that for further insight, additional surveillance tools and strategies at the national and sub-national levels are needed. Wolters Kluwer - Medknow 2020-05 /pmc/articles/PMC7530445/ /pubmed/32611914 http://dx.doi.org/10.4103/ijmr.IJMR_1896_20 Text en Copyright: © 2020 Indian Journal of Medical Research http://creativecommons.org/licenses/by-nc-sa/4.0 This is an open access journal, and articles are distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 License, which allows others to remix, tweak, and build upon the work non-commercially, as long as appropriate credit is given and the new creations are licensed under the identical terms.
spellingShingle Original Article
Abraham, Priya
Aggarwal, Neeraj
Babu, Giridhara R.
Barani, Suganya
Bhargava, Balram
Bhatnagar, Tarun
Dhama, Ajay Singh
Gangakhedkar, Raman R.
Giri, Sidhartha
Gupta, Nivedita
Kurup, Karishma K.
Manickam, Ponnaiah
Murhekar, Manoj
Potdar, Varsha
Praharaj, Ira
Rade, Kiran
Reddy, D.C.S.
Saravanakumar, V.
Shah, Naman
Singh, Harpreet
Thangaraj, Jeromie Wesley Vivian
Yadav, Naveen
Laboratory surveillance for SARS-CoV-2 in India: Performance of testing & descriptive epidemiology of detected COVID-19, January 22 - April 30, 2020
title Laboratory surveillance for SARS-CoV-2 in India: Performance of testing & descriptive epidemiology of detected COVID-19, January 22 - April 30, 2020
title_full Laboratory surveillance for SARS-CoV-2 in India: Performance of testing & descriptive epidemiology of detected COVID-19, January 22 - April 30, 2020
title_fullStr Laboratory surveillance for SARS-CoV-2 in India: Performance of testing & descriptive epidemiology of detected COVID-19, January 22 - April 30, 2020
title_full_unstemmed Laboratory surveillance for SARS-CoV-2 in India: Performance of testing & descriptive epidemiology of detected COVID-19, January 22 - April 30, 2020
title_short Laboratory surveillance for SARS-CoV-2 in India: Performance of testing & descriptive epidemiology of detected COVID-19, January 22 - April 30, 2020
title_sort laboratory surveillance for sars-cov-2 in india: performance of testing & descriptive epidemiology of detected covid-19, january 22 - april 30, 2020
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7530445/
https://www.ncbi.nlm.nih.gov/pubmed/32611914
http://dx.doi.org/10.4103/ijmr.IJMR_1896_20
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