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Possibilities in the Application of Machine Learning on Bioimpedance Time-series
The relation between a biological process and the changes in passive electrical properties of the tissue is often non-linear, in which developing prediction models based on bioimpedance spectra is not trivial. Relevant information on tissue status may also lie in characteristic developments in the b...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Sciendo
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7531209/ https://www.ncbi.nlm.nih.gov/pubmed/33584879 http://dx.doi.org/10.2478/joeb-2019-0004 |
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author | Tronstad, Christian Strand-Amundsen, Runar |
author_facet | Tronstad, Christian Strand-Amundsen, Runar |
author_sort | Tronstad, Christian |
collection | PubMed |
description | The relation between a biological process and the changes in passive electrical properties of the tissue is often non-linear, in which developing prediction models based on bioimpedance spectra is not trivial. Relevant information on tissue status may also lie in characteristic developments in the bioimpedance spectra over time, often neglected by conventional methods. The aim of this study was to explore possibilities in machine learning methods for time series of bioimpedance spectra, where we used organ ischemia as an example. Based on published data on the development of the bioimpedance spectrum during liver ischemia, a simulation model was made and used to generate sets of synthetic data with different levels of organ-to-organ variation, measurement noise and drift. Three types of artificial neural networks were employed in learning to predict the ischemic duration, based on the simulated datasets. The simulated prediction performance was very dependent on the amount of training examples, the organ-to-organ variation and the selection of input variables from the bioimpedance spectrum. The performance was also affected by noise and drift in the measurement, but a recurrent neural network with long short-term memory units could obtain good predictions even on noisy and drifting measurements. This approach may be relevant for further exploration on several applications of bioimpedance having the purpose of predicting a biological state based on spectra measured over time. |
format | Online Article Text |
id | pubmed-7531209 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Sciendo |
record_format | MEDLINE/PubMed |
spelling | pubmed-75312092021-02-11 Possibilities in the Application of Machine Learning on Bioimpedance Time-series Tronstad, Christian Strand-Amundsen, Runar J Electr Bioimpedance Research Articles The relation between a biological process and the changes in passive electrical properties of the tissue is often non-linear, in which developing prediction models based on bioimpedance spectra is not trivial. Relevant information on tissue status may also lie in characteristic developments in the bioimpedance spectra over time, often neglected by conventional methods. The aim of this study was to explore possibilities in machine learning methods for time series of bioimpedance spectra, where we used organ ischemia as an example. Based on published data on the development of the bioimpedance spectrum during liver ischemia, a simulation model was made and used to generate sets of synthetic data with different levels of organ-to-organ variation, measurement noise and drift. Three types of artificial neural networks were employed in learning to predict the ischemic duration, based on the simulated datasets. The simulated prediction performance was very dependent on the amount of training examples, the organ-to-organ variation and the selection of input variables from the bioimpedance spectrum. The performance was also affected by noise and drift in the measurement, but a recurrent neural network with long short-term memory units could obtain good predictions even on noisy and drifting measurements. This approach may be relevant for further exploration on several applications of bioimpedance having the purpose of predicting a biological state based on spectra measured over time. Sciendo 2019-07-02 /pmc/articles/PMC7531209/ /pubmed/33584879 http://dx.doi.org/10.2478/joeb-2019-0004 Text en © 2019 Tronstad, Strand-Amundsen, published by Sciendo http://creativecommons.org/licenses/by-nc-nd/3.0 This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License. |
spellingShingle | Research Articles Tronstad, Christian Strand-Amundsen, Runar Possibilities in the Application of Machine Learning on Bioimpedance Time-series |
title | Possibilities in the Application of Machine Learning on Bioimpedance Time-series |
title_full | Possibilities in the Application of Machine Learning on Bioimpedance Time-series |
title_fullStr | Possibilities in the Application of Machine Learning on Bioimpedance Time-series |
title_full_unstemmed | Possibilities in the Application of Machine Learning on Bioimpedance Time-series |
title_short | Possibilities in the Application of Machine Learning on Bioimpedance Time-series |
title_sort | possibilities in the application of machine learning on bioimpedance time-series |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7531209/ https://www.ncbi.nlm.nih.gov/pubmed/33584879 http://dx.doi.org/10.2478/joeb-2019-0004 |
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