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Multi-omics prediction of immune-related adverse events during checkpoint immunotherapy

Immune-related adverse events (irAEs), caused by anti-PD-1/PD-L1 antibodies, can lead to fulminant and even fatal consequences and thus require early detection and aggressive management. However, a comprehensive approach to identify biomarkers of irAE is lacking. Here, we utilize a strategy that com...

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Autores principales: Jing, Ying, Liu, Jin, Ye, Youqiong, Pan, Lei, Deng, Hui, Wang, Yushu, Yang, Yang, Diao, Lixia, Lin, Steven H., Mills, Gordon B., Zhuang, Guanglei, Xue, Xinying, Han, Leng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7532211/
https://www.ncbi.nlm.nih.gov/pubmed/33009409
http://dx.doi.org/10.1038/s41467-020-18742-9
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author Jing, Ying
Liu, Jin
Ye, Youqiong
Pan, Lei
Deng, Hui
Wang, Yushu
Yang, Yang
Diao, Lixia
Lin, Steven H.
Mills, Gordon B.
Zhuang, Guanglei
Xue, Xinying
Han, Leng
author_facet Jing, Ying
Liu, Jin
Ye, Youqiong
Pan, Lei
Deng, Hui
Wang, Yushu
Yang, Yang
Diao, Lixia
Lin, Steven H.
Mills, Gordon B.
Zhuang, Guanglei
Xue, Xinying
Han, Leng
author_sort Jing, Ying
collection PubMed
description Immune-related adverse events (irAEs), caused by anti-PD-1/PD-L1 antibodies, can lead to fulminant and even fatal consequences and thus require early detection and aggressive management. However, a comprehensive approach to identify biomarkers of irAE is lacking. Here, we utilize a strategy that combines pharmacovigilance data and omics data, and evaluate associations between multi-omics factors and irAE reporting odds ratio across different cancer types. We identify a bivariate regression model of LCP1 and ADPGK that can accurately predict irAE. We further validate LCP1 and ADPGK as biomarkers in an independent patient-level cohort. Our approach provides a method for identifying potential biomarkers of irAE in cancer immunotherapy using both pharmacovigilance data and multi-omics data.
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spelling pubmed-75322112020-10-19 Multi-omics prediction of immune-related adverse events during checkpoint immunotherapy Jing, Ying Liu, Jin Ye, Youqiong Pan, Lei Deng, Hui Wang, Yushu Yang, Yang Diao, Lixia Lin, Steven H. Mills, Gordon B. Zhuang, Guanglei Xue, Xinying Han, Leng Nat Commun Article Immune-related adverse events (irAEs), caused by anti-PD-1/PD-L1 antibodies, can lead to fulminant and even fatal consequences and thus require early detection and aggressive management. However, a comprehensive approach to identify biomarkers of irAE is lacking. Here, we utilize a strategy that combines pharmacovigilance data and omics data, and evaluate associations between multi-omics factors and irAE reporting odds ratio across different cancer types. We identify a bivariate regression model of LCP1 and ADPGK that can accurately predict irAE. We further validate LCP1 and ADPGK as biomarkers in an independent patient-level cohort. Our approach provides a method for identifying potential biomarkers of irAE in cancer immunotherapy using both pharmacovigilance data and multi-omics data. Nature Publishing Group UK 2020-10-02 /pmc/articles/PMC7532211/ /pubmed/33009409 http://dx.doi.org/10.1038/s41467-020-18742-9 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Jing, Ying
Liu, Jin
Ye, Youqiong
Pan, Lei
Deng, Hui
Wang, Yushu
Yang, Yang
Diao, Lixia
Lin, Steven H.
Mills, Gordon B.
Zhuang, Guanglei
Xue, Xinying
Han, Leng
Multi-omics prediction of immune-related adverse events during checkpoint immunotherapy
title Multi-omics prediction of immune-related adverse events during checkpoint immunotherapy
title_full Multi-omics prediction of immune-related adverse events during checkpoint immunotherapy
title_fullStr Multi-omics prediction of immune-related adverse events during checkpoint immunotherapy
title_full_unstemmed Multi-omics prediction of immune-related adverse events during checkpoint immunotherapy
title_short Multi-omics prediction of immune-related adverse events during checkpoint immunotherapy
title_sort multi-omics prediction of immune-related adverse events during checkpoint immunotherapy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7532211/
https://www.ncbi.nlm.nih.gov/pubmed/33009409
http://dx.doi.org/10.1038/s41467-020-18742-9
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