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Synthesis, spectral analysis, molecular docking and DFT studies of 3-(2, 6-dichlorophenyl)-acrylamide and its dimer through QTAIM approach

In this paper, an experimental study of (E)-3-(2,6-dichlorophenyl)-acrylamide and its associated dimer were analysed with molecular docking, DFT and QTAIM approach. To spot, describe, and measure the non-covalent interactions (NCIs) of the atoms in the molecules of the monomer and its dimer, some im...

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Autores principales: Shukla, Akhilesh Kumar, Chaudhary, Aniruddh Prasad, Pandey, Jyoti
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7533364/
https://www.ncbi.nlm.nih.gov/pubmed/33033758
http://dx.doi.org/10.1016/j.heliyon.2020.e05016
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author Shukla, Akhilesh Kumar
Chaudhary, Aniruddh Prasad
Pandey, Jyoti
author_facet Shukla, Akhilesh Kumar
Chaudhary, Aniruddh Prasad
Pandey, Jyoti
author_sort Shukla, Akhilesh Kumar
collection PubMed
description In this paper, an experimental study of (E)-3-(2,6-dichlorophenyl)-acrylamide and its associated dimer were analysed with molecular docking, DFT and QTAIM approach. To spot, describe, and measure the non-covalent interactions (NCIs) of the atoms in the molecules of the monomer and its dimer, some important topological parameters of the charge densities, ρ(r) acquired from the Bader's QTAIM tool are determined, quantitatively. The bond paths are shown to persist for a range of five types of NCIs such as weak conventional (C-H···Cl) and nonconventional (C-O···C and N-O···Cl), medium (N-H···Cl) and strong O-H···O NCIs revealed by the existence of BCPs (ranging from 1.921 - 3.259 Å). A comprehensive explanation of the spectroscopic data like vibrational, electronic, and NMR spectra is reported along with the NLO, reactivity. Hydroxamic acid exhibited an excellent nonlinear optical activity (β(0) = 14.8098 × 10(−30)). To predict the various reactive sites in the molecule, molecular electrostatic potential diagrams were displayed.
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spelling pubmed-75333642020-10-07 Synthesis, spectral analysis, molecular docking and DFT studies of 3-(2, 6-dichlorophenyl)-acrylamide and its dimer through QTAIM approach Shukla, Akhilesh Kumar Chaudhary, Aniruddh Prasad Pandey, Jyoti Heliyon Research Article In this paper, an experimental study of (E)-3-(2,6-dichlorophenyl)-acrylamide and its associated dimer were analysed with molecular docking, DFT and QTAIM approach. To spot, describe, and measure the non-covalent interactions (NCIs) of the atoms in the molecules of the monomer and its dimer, some important topological parameters of the charge densities, ρ(r) acquired from the Bader's QTAIM tool are determined, quantitatively. The bond paths are shown to persist for a range of five types of NCIs such as weak conventional (C-H···Cl) and nonconventional (C-O···C and N-O···Cl), medium (N-H···Cl) and strong O-H···O NCIs revealed by the existence of BCPs (ranging from 1.921 - 3.259 Å). A comprehensive explanation of the spectroscopic data like vibrational, electronic, and NMR spectra is reported along with the NLO, reactivity. Hydroxamic acid exhibited an excellent nonlinear optical activity (β(0) = 14.8098 × 10(−30)). To predict the various reactive sites in the molecule, molecular electrostatic potential diagrams were displayed. Elsevier 2020-10-03 /pmc/articles/PMC7533364/ /pubmed/33033758 http://dx.doi.org/10.1016/j.heliyon.2020.e05016 Text en © 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Shukla, Akhilesh Kumar
Chaudhary, Aniruddh Prasad
Pandey, Jyoti
Synthesis, spectral analysis, molecular docking and DFT studies of 3-(2, 6-dichlorophenyl)-acrylamide and its dimer through QTAIM approach
title Synthesis, spectral analysis, molecular docking and DFT studies of 3-(2, 6-dichlorophenyl)-acrylamide and its dimer through QTAIM approach
title_full Synthesis, spectral analysis, molecular docking and DFT studies of 3-(2, 6-dichlorophenyl)-acrylamide and its dimer through QTAIM approach
title_fullStr Synthesis, spectral analysis, molecular docking and DFT studies of 3-(2, 6-dichlorophenyl)-acrylamide and its dimer through QTAIM approach
title_full_unstemmed Synthesis, spectral analysis, molecular docking and DFT studies of 3-(2, 6-dichlorophenyl)-acrylamide and its dimer through QTAIM approach
title_short Synthesis, spectral analysis, molecular docking and DFT studies of 3-(2, 6-dichlorophenyl)-acrylamide and its dimer through QTAIM approach
title_sort synthesis, spectral analysis, molecular docking and dft studies of 3-(2, 6-dichlorophenyl)-acrylamide and its dimer through qtaim approach
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7533364/
https://www.ncbi.nlm.nih.gov/pubmed/33033758
http://dx.doi.org/10.1016/j.heliyon.2020.e05016
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