Cargando…

Uncovering potential differentially expressed miRNAs and targeted mRNAs in myocardial infarction based on integrating analysis

Myocardial infarction (MI) is one of the leading causes of death globally. The aim of the present study was to find valuable microRNAs (miRNAs/miRs) and target mRNAs in order to contribute to our understanding of the pathology of MI. miRNA and mRNA data were downloaded for differential expression an...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Shiai, Cao, Na
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7533449/
https://www.ncbi.nlm.nih.gov/pubmed/33000230
http://dx.doi.org/10.3892/mmr.2020.11517
_version_ 1783590136476336128
author Wang, Shiai
Cao, Na
author_facet Wang, Shiai
Cao, Na
author_sort Wang, Shiai
collection PubMed
description Myocardial infarction (MI) is one of the leading causes of death globally. The aim of the present study was to find valuable microRNAs (miRNAs/miRs) and target mRNAs in order to contribute to our understanding of the pathology of MI. miRNA and mRNA data were downloaded for differential expression analysis. Then, a regulatory network between miRNAs and mRNAs was established, followed by function annotation of target mRNAs. Thirdly, prognosis and diagnostic analysis of differentially methylated target mRNAs were performed. Finally, an in vitro experiment was used to validate the expression of selected miRNAs and target mRNAs. A total of 19 differentially expressed miRNAs and 1,007 differentially expressed mRNAs were identified. Several regulatory interaction pairs between miRNA and mRNAs were identified, such as hsa-miR-142-2p-long-chain-fatty-acid-CoA ligase 1 (ACSL1), hsa-miR-15a-3p-nicotinamide phosphoribosyltransferase (NAMPT), hsa-miR-33b-5p-regulator of G-protein signaling 2 (RGS2), hsa-miR-17-3p-Jun dimerization protein 2 (JDP2), hsa-miR-24-1-5p-aquaporin-9 (AQP9) and hsa-miR-34a-5p-STAT1/AKT3. Of note, it was demonstrated that ACSL1, NAMPT, RGS2, JDP2, AQP9, STAT1 and AKT3 had diagnostic and prognostic values for patients with MI. In addition, STAT1 was involved in the ‘chemokine signaling pathway’ and ‘Jak-STAT signaling pathway’. AKT3 was involved in both the ‘MAPK signaling pathway’ and ‘T cell receptor signaling pathway’. Reverse transcription-quantitative PCR validation of hsa-miR-142-3p, hsa-miR-15a-3p, hsa-miR-33b-5p, ACSL1, NAMPT, RGS2 and JDP2 expression was consistent with the bioinformatics analysis. In conclusion, the identified miRNAs and mRNAs may be involved in the pathology of MI.
format Online
Article
Text
id pubmed-7533449
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher D.A. Spandidos
record_format MEDLINE/PubMed
spelling pubmed-75334492020-10-07 Uncovering potential differentially expressed miRNAs and targeted mRNAs in myocardial infarction based on integrating analysis Wang, Shiai Cao, Na Mol Med Rep Articles Myocardial infarction (MI) is one of the leading causes of death globally. The aim of the present study was to find valuable microRNAs (miRNAs/miRs) and target mRNAs in order to contribute to our understanding of the pathology of MI. miRNA and mRNA data were downloaded for differential expression analysis. Then, a regulatory network between miRNAs and mRNAs was established, followed by function annotation of target mRNAs. Thirdly, prognosis and diagnostic analysis of differentially methylated target mRNAs were performed. Finally, an in vitro experiment was used to validate the expression of selected miRNAs and target mRNAs. A total of 19 differentially expressed miRNAs and 1,007 differentially expressed mRNAs were identified. Several regulatory interaction pairs between miRNA and mRNAs were identified, such as hsa-miR-142-2p-long-chain-fatty-acid-CoA ligase 1 (ACSL1), hsa-miR-15a-3p-nicotinamide phosphoribosyltransferase (NAMPT), hsa-miR-33b-5p-regulator of G-protein signaling 2 (RGS2), hsa-miR-17-3p-Jun dimerization protein 2 (JDP2), hsa-miR-24-1-5p-aquaporin-9 (AQP9) and hsa-miR-34a-5p-STAT1/AKT3. Of note, it was demonstrated that ACSL1, NAMPT, RGS2, JDP2, AQP9, STAT1 and AKT3 had diagnostic and prognostic values for patients with MI. In addition, STAT1 was involved in the ‘chemokine signaling pathway’ and ‘Jak-STAT signaling pathway’. AKT3 was involved in both the ‘MAPK signaling pathway’ and ‘T cell receptor signaling pathway’. Reverse transcription-quantitative PCR validation of hsa-miR-142-3p, hsa-miR-15a-3p, hsa-miR-33b-5p, ACSL1, NAMPT, RGS2 and JDP2 expression was consistent with the bioinformatics analysis. In conclusion, the identified miRNAs and mRNAs may be involved in the pathology of MI. D.A. Spandidos 2020-11 2020-09-17 /pmc/articles/PMC7533449/ /pubmed/33000230 http://dx.doi.org/10.3892/mmr.2020.11517 Text en Copyright: © Wang et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
spellingShingle Articles
Wang, Shiai
Cao, Na
Uncovering potential differentially expressed miRNAs and targeted mRNAs in myocardial infarction based on integrating analysis
title Uncovering potential differentially expressed miRNAs and targeted mRNAs in myocardial infarction based on integrating analysis
title_full Uncovering potential differentially expressed miRNAs and targeted mRNAs in myocardial infarction based on integrating analysis
title_fullStr Uncovering potential differentially expressed miRNAs and targeted mRNAs in myocardial infarction based on integrating analysis
title_full_unstemmed Uncovering potential differentially expressed miRNAs and targeted mRNAs in myocardial infarction based on integrating analysis
title_short Uncovering potential differentially expressed miRNAs and targeted mRNAs in myocardial infarction based on integrating analysis
title_sort uncovering potential differentially expressed mirnas and targeted mrnas in myocardial infarction based on integrating analysis
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7533449/
https://www.ncbi.nlm.nih.gov/pubmed/33000230
http://dx.doi.org/10.3892/mmr.2020.11517
work_keys_str_mv AT wangshiai uncoveringpotentialdifferentiallyexpressedmirnasandtargetedmrnasinmyocardialinfarctionbasedonintegratinganalysis
AT caona uncoveringpotentialdifferentiallyexpressedmirnasandtargetedmrnasinmyocardialinfarctionbasedonintegratinganalysis