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Isfahan and Covid-19: Deep spatiotemporal representation

The coronavirus COVID-19 is affecting 213 countries and territories around the world. Iran was one of the first affected countries by this virus. Isfahan, as the third most populated province of Iran, experienced a noticeable epidemic. The prediction of epidemic size, peak value, and peak time can h...

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Autores principales: Kafieh, Rahele, Saeedizadeh, Narges, Arian, Roya, Amini, Zahra, Serej, Nasim Dadashi, Vaezi, Atefeh, Javanmard, Shaghayegh Haghjooy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7534756/
https://www.ncbi.nlm.nih.gov/pubmed/33041534
http://dx.doi.org/10.1016/j.chaos.2020.110339
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author Kafieh, Rahele
Saeedizadeh, Narges
Arian, Roya
Amini, Zahra
Serej, Nasim Dadashi
Vaezi, Atefeh
Javanmard, Shaghayegh Haghjooy
author_facet Kafieh, Rahele
Saeedizadeh, Narges
Arian, Roya
Amini, Zahra
Serej, Nasim Dadashi
Vaezi, Atefeh
Javanmard, Shaghayegh Haghjooy
author_sort Kafieh, Rahele
collection PubMed
description The coronavirus COVID-19 is affecting 213 countries and territories around the world. Iran was one of the first affected countries by this virus. Isfahan, as the third most populated province of Iran, experienced a noticeable epidemic. The prediction of epidemic size, peak value, and peak time can help policymakers in correct decisions. In this study, deep learning is selected as a powerful tool for forecasting this epidemic in Isfahan. A combination of effective Social Determinant of Health (SDH) and the occurrences of COVID-19 data are used as spatiotemporal input by using time-series information from different locations. Different models are utilized, and the best performance is found to be for a tailored type of long short-term memory (LSTM). This new method incorporates the mutual effect of all classes (confirmed/ death / recovered) in the prediction process. The future trajectory of the outbreak in Isfahan is forecasted with the proposed model. The paper demonstrates the positive effect of adding SDHs in pandemic prediction. Furthermore, the effectiveness of different SDHs is discussed, and the most effective terms are introduced. The method expresses high ability in both short- and long- term forecasting of the outbreak. The model proves that in predicting one class (like the number of confirmed cases), the effect of other accompanying numbers (like death and recovered cases) cannot be ignored. In conclusion, the superiorities of this model (particularity the long term predication ability) turn it into a reliable tool for helping the health decision-makers.
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spelling pubmed-75347562020-10-06 Isfahan and Covid-19: Deep spatiotemporal representation Kafieh, Rahele Saeedizadeh, Narges Arian, Roya Amini, Zahra Serej, Nasim Dadashi Vaezi, Atefeh Javanmard, Shaghayegh Haghjooy Chaos Solitons Fractals Article The coronavirus COVID-19 is affecting 213 countries and territories around the world. Iran was one of the first affected countries by this virus. Isfahan, as the third most populated province of Iran, experienced a noticeable epidemic. The prediction of epidemic size, peak value, and peak time can help policymakers in correct decisions. In this study, deep learning is selected as a powerful tool for forecasting this epidemic in Isfahan. A combination of effective Social Determinant of Health (SDH) and the occurrences of COVID-19 data are used as spatiotemporal input by using time-series information from different locations. Different models are utilized, and the best performance is found to be for a tailored type of long short-term memory (LSTM). This new method incorporates the mutual effect of all classes (confirmed/ death / recovered) in the prediction process. The future trajectory of the outbreak in Isfahan is forecasted with the proposed model. The paper demonstrates the positive effect of adding SDHs in pandemic prediction. Furthermore, the effectiveness of different SDHs is discussed, and the most effective terms are introduced. The method expresses high ability in both short- and long- term forecasting of the outbreak. The model proves that in predicting one class (like the number of confirmed cases), the effect of other accompanying numbers (like death and recovered cases) cannot be ignored. In conclusion, the superiorities of this model (particularity the long term predication ability) turn it into a reliable tool for helping the health decision-makers. Elsevier Ltd. 2020-12 2020-10-05 /pmc/articles/PMC7534756/ /pubmed/33041534 http://dx.doi.org/10.1016/j.chaos.2020.110339 Text en © 2020 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Kafieh, Rahele
Saeedizadeh, Narges
Arian, Roya
Amini, Zahra
Serej, Nasim Dadashi
Vaezi, Atefeh
Javanmard, Shaghayegh Haghjooy
Isfahan and Covid-19: Deep spatiotemporal representation
title Isfahan and Covid-19: Deep spatiotemporal representation
title_full Isfahan and Covid-19: Deep spatiotemporal representation
title_fullStr Isfahan and Covid-19: Deep spatiotemporal representation
title_full_unstemmed Isfahan and Covid-19: Deep spatiotemporal representation
title_short Isfahan and Covid-19: Deep spatiotemporal representation
title_sort isfahan and covid-19: deep spatiotemporal representation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7534756/
https://www.ncbi.nlm.nih.gov/pubmed/33041534
http://dx.doi.org/10.1016/j.chaos.2020.110339
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