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Computational tools for drawing, building and displaying carbohydrates: a visual guide

Drawing and visualisation of molecular structures are some of the most common tasks carried out in structural glycobiology, typically using various software. In this perspective article, we outline developments in the computational tools for the sketching, visualisation and modelling of glycans. The...

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Detalles Bibliográficos
Autores principales: Lal, Kanhaya, Bermeo, Rafael, Perez, Serge
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Beilstein-Institut 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7537382/
https://www.ncbi.nlm.nih.gov/pubmed/33082879
http://dx.doi.org/10.3762/bjoc.16.199
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author Lal, Kanhaya
Bermeo, Rafael
Perez, Serge
author_facet Lal, Kanhaya
Bermeo, Rafael
Perez, Serge
author_sort Lal, Kanhaya
collection PubMed
description Drawing and visualisation of molecular structures are some of the most common tasks carried out in structural glycobiology, typically using various software. In this perspective article, we outline developments in the computational tools for the sketching, visualisation and modelling of glycans. The article also provides details on the standard representation of glycans, and glycoconjugates, which helps the communication of structure details within the scientific community. We highlight the comparative analysis of the available tools which could help researchers to perform various tasks related to structure representation and model building of glycans. These tools can be useful for glycobiologists or any researcher looking for a ready to use, simple program for the sketching or building of glycans.
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spelling pubmed-75373822020-10-19 Computational tools for drawing, building and displaying carbohydrates: a visual guide Lal, Kanhaya Bermeo, Rafael Perez, Serge Beilstein J Org Chem Review Drawing and visualisation of molecular structures are some of the most common tasks carried out in structural glycobiology, typically using various software. In this perspective article, we outline developments in the computational tools for the sketching, visualisation and modelling of glycans. The article also provides details on the standard representation of glycans, and glycoconjugates, which helps the communication of structure details within the scientific community. We highlight the comparative analysis of the available tools which could help researchers to perform various tasks related to structure representation and model building of glycans. These tools can be useful for glycobiologists or any researcher looking for a ready to use, simple program for the sketching or building of glycans. Beilstein-Institut 2020-10-02 /pmc/articles/PMC7537382/ /pubmed/33082879 http://dx.doi.org/10.3762/bjoc.16.199 Text en Copyright © 2020, Lal et al. https://creativecommons.org/licenses/by/4.0https://www.beilstein-journals.org/bjoc/termsThis is an Open Access article under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0). Please note that the reuse, redistribution and reproduction in particular requires that the authors and source are credited. The license is subject to the Beilstein Journal of Organic Chemistry terms and conditions: (https://www.beilstein-journals.org/bjoc/terms)
spellingShingle Review
Lal, Kanhaya
Bermeo, Rafael
Perez, Serge
Computational tools for drawing, building and displaying carbohydrates: a visual guide
title Computational tools for drawing, building and displaying carbohydrates: a visual guide
title_full Computational tools for drawing, building and displaying carbohydrates: a visual guide
title_fullStr Computational tools for drawing, building and displaying carbohydrates: a visual guide
title_full_unstemmed Computational tools for drawing, building and displaying carbohydrates: a visual guide
title_short Computational tools for drawing, building and displaying carbohydrates: a visual guide
title_sort computational tools for drawing, building and displaying carbohydrates: a visual guide
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7537382/
https://www.ncbi.nlm.nih.gov/pubmed/33082879
http://dx.doi.org/10.3762/bjoc.16.199
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