Cargando…

Molecular phylogenetic, population genetic and demographic studies of Nodularia douglasiae and Nodularia breviconcha based on CO1 and 16S rRNA

Freshwater mussels belonging to the genus Nodularia (Family Unionidae) are known to be widely distributed in East Asia. Although phylogenetic and population genetic studies have been performed for these species, there still remain unresolved questions in their taxonomic status and biogeographic dist...

Descripción completa

Detalles Bibliográficos
Autores principales: Choi, Eun Hwa, Kim, Gyeongmin, Cha, Seung Hyun, Lee, Jun-Sang, Ryu, Shi Hyun, Suk, Ho Young, Lee, Young Sup, Baek, Su Youn, Hwang, Ui Wook
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7538972/
https://www.ncbi.nlm.nih.gov/pubmed/33024129
http://dx.doi.org/10.1038/s41598-020-72015-5
_version_ 1783590969270075392
author Choi, Eun Hwa
Kim, Gyeongmin
Cha, Seung Hyun
Lee, Jun-Sang
Ryu, Shi Hyun
Suk, Ho Young
Lee, Young Sup
Baek, Su Youn
Hwang, Ui Wook
author_facet Choi, Eun Hwa
Kim, Gyeongmin
Cha, Seung Hyun
Lee, Jun-Sang
Ryu, Shi Hyun
Suk, Ho Young
Lee, Young Sup
Baek, Su Youn
Hwang, Ui Wook
author_sort Choi, Eun Hwa
collection PubMed
description Freshwater mussels belonging to the genus Nodularia (Family Unionidae) are known to be widely distributed in East Asia. Although phylogenetic and population genetic studies have been performed for these species, there still remain unresolved questions in their taxonomic status and biogeographic distribution pathways. Here, the nucleotide sequences of CO1 and 16S rRNA were newly determined from 86 N. douglasiae and 83 N. breviconcha individuals collected on the Korean Peninsula. Based on these data, we revealed the following results: (1) N. douglasiae can be divided into the three genetic clades of A (only found in Korean Peninsula), B (widely distributed in East Asia), and C (only found in the west of China and Russia), (2) the clade A is not an independent species but a concrete member of N. douglasiae given the lack of genetic differences between the clades A and B, and (3) N. breviconcha is not a subspecies of N. douglasiae but an independent species apart from N. douglasiae. In addition, we suggested the plausible scenarios of biogeographic distribution events and demographic history of Nodularia species.
format Online
Article
Text
id pubmed-7538972
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-75389722020-10-08 Molecular phylogenetic, population genetic and demographic studies of Nodularia douglasiae and Nodularia breviconcha based on CO1 and 16S rRNA Choi, Eun Hwa Kim, Gyeongmin Cha, Seung Hyun Lee, Jun-Sang Ryu, Shi Hyun Suk, Ho Young Lee, Young Sup Baek, Su Youn Hwang, Ui Wook Sci Rep Article Freshwater mussels belonging to the genus Nodularia (Family Unionidae) are known to be widely distributed in East Asia. Although phylogenetic and population genetic studies have been performed for these species, there still remain unresolved questions in their taxonomic status and biogeographic distribution pathways. Here, the nucleotide sequences of CO1 and 16S rRNA were newly determined from 86 N. douglasiae and 83 N. breviconcha individuals collected on the Korean Peninsula. Based on these data, we revealed the following results: (1) N. douglasiae can be divided into the three genetic clades of A (only found in Korean Peninsula), B (widely distributed in East Asia), and C (only found in the west of China and Russia), (2) the clade A is not an independent species but a concrete member of N. douglasiae given the lack of genetic differences between the clades A and B, and (3) N. breviconcha is not a subspecies of N. douglasiae but an independent species apart from N. douglasiae. In addition, we suggested the plausible scenarios of biogeographic distribution events and demographic history of Nodularia species. Nature Publishing Group UK 2020-10-06 /pmc/articles/PMC7538972/ /pubmed/33024129 http://dx.doi.org/10.1038/s41598-020-72015-5 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Choi, Eun Hwa
Kim, Gyeongmin
Cha, Seung Hyun
Lee, Jun-Sang
Ryu, Shi Hyun
Suk, Ho Young
Lee, Young Sup
Baek, Su Youn
Hwang, Ui Wook
Molecular phylogenetic, population genetic and demographic studies of Nodularia douglasiae and Nodularia breviconcha based on CO1 and 16S rRNA
title Molecular phylogenetic, population genetic and demographic studies of Nodularia douglasiae and Nodularia breviconcha based on CO1 and 16S rRNA
title_full Molecular phylogenetic, population genetic and demographic studies of Nodularia douglasiae and Nodularia breviconcha based on CO1 and 16S rRNA
title_fullStr Molecular phylogenetic, population genetic and demographic studies of Nodularia douglasiae and Nodularia breviconcha based on CO1 and 16S rRNA
title_full_unstemmed Molecular phylogenetic, population genetic and demographic studies of Nodularia douglasiae and Nodularia breviconcha based on CO1 and 16S rRNA
title_short Molecular phylogenetic, population genetic and demographic studies of Nodularia douglasiae and Nodularia breviconcha based on CO1 and 16S rRNA
title_sort molecular phylogenetic, population genetic and demographic studies of nodularia douglasiae and nodularia breviconcha based on co1 and 16s rrna
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7538972/
https://www.ncbi.nlm.nih.gov/pubmed/33024129
http://dx.doi.org/10.1038/s41598-020-72015-5
work_keys_str_mv AT choieunhwa molecularphylogeneticpopulationgeneticanddemographicstudiesofnodulariadouglasiaeandnodulariabreviconchabasedonco1and16srrna
AT kimgyeongmin molecularphylogeneticpopulationgeneticanddemographicstudiesofnodulariadouglasiaeandnodulariabreviconchabasedonco1and16srrna
AT chaseunghyun molecularphylogeneticpopulationgeneticanddemographicstudiesofnodulariadouglasiaeandnodulariabreviconchabasedonco1and16srrna
AT leejunsang molecularphylogeneticpopulationgeneticanddemographicstudiesofnodulariadouglasiaeandnodulariabreviconchabasedonco1and16srrna
AT ryushihyun molecularphylogeneticpopulationgeneticanddemographicstudiesofnodulariadouglasiaeandnodulariabreviconchabasedonco1and16srrna
AT sukhoyoung molecularphylogeneticpopulationgeneticanddemographicstudiesofnodulariadouglasiaeandnodulariabreviconchabasedonco1and16srrna
AT leeyoungsup molecularphylogeneticpopulationgeneticanddemographicstudiesofnodulariadouglasiaeandnodulariabreviconchabasedonco1and16srrna
AT baeksuyoun molecularphylogeneticpopulationgeneticanddemographicstudiesofnodulariadouglasiaeandnodulariabreviconchabasedonco1and16srrna
AT hwanguiwook molecularphylogeneticpopulationgeneticanddemographicstudiesofnodulariadouglasiaeandnodulariabreviconchabasedonco1and16srrna