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Systematic Evaluation of Imine‐Reducing Enzymes: Common Principles in Imine Reductases, β‐Hydroxy Acid Dehydrogenases, and Short‐Chain Dehydrogenases/ Reductases
The enzymatic, asymmetric reduction of imines is catalyzed by imine reductases (IREDs), members of the short‐chain dehydrogenase/reductase (SDR) family, and β‐hydroxy acid dehydrogenase (βHAD) variants. Systematic evaluation of the structures and substrate‐binding sites of the three enzyme families...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7540600/ https://www.ncbi.nlm.nih.gov/pubmed/32311225 http://dx.doi.org/10.1002/cbic.202000213 |
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author | Stockinger, Peter Roth, Sebastian Müller, Michael Pleiss, Jürgen |
author_facet | Stockinger, Peter Roth, Sebastian Müller, Michael Pleiss, Jürgen |
author_sort | Stockinger, Peter |
collection | PubMed |
description | The enzymatic, asymmetric reduction of imines is catalyzed by imine reductases (IREDs), members of the short‐chain dehydrogenase/reductase (SDR) family, and β‐hydroxy acid dehydrogenase (βHAD) variants. Systematic evaluation of the structures and substrate‐binding sites of the three enzyme families has revealed four common principles for imine reduction: structurally conserved cofactor‐binding domains; tyrosine, aspartate, or glutamate as proton donor; at least four characteristic flanking residues that adapt the donor's pK (a) and polarize the substrate; and a negative electrostatic potential in the substrate‐binding site to stabilize the transition state. As additional catalytically relevant positions, we propose alternative proton donors in IREDs and βHADs as well as proton relays in IREDs, βHADs, and SDRs. The functional role of flanking residues was experimentally confirmed by alanine scanning of the imine‐reducing SDR from Zephyranthes treatiae. Mutating the “gatekeeping” phenylalanine at standard position 200 resulted in a tenfold increase in imine‐reducing activity. |
format | Online Article Text |
id | pubmed-7540600 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-75406002020-10-15 Systematic Evaluation of Imine‐Reducing Enzymes: Common Principles in Imine Reductases, β‐Hydroxy Acid Dehydrogenases, and Short‐Chain Dehydrogenases/ Reductases Stockinger, Peter Roth, Sebastian Müller, Michael Pleiss, Jürgen Chembiochem Full Papers The enzymatic, asymmetric reduction of imines is catalyzed by imine reductases (IREDs), members of the short‐chain dehydrogenase/reductase (SDR) family, and β‐hydroxy acid dehydrogenase (βHAD) variants. Systematic evaluation of the structures and substrate‐binding sites of the three enzyme families has revealed four common principles for imine reduction: structurally conserved cofactor‐binding domains; tyrosine, aspartate, or glutamate as proton donor; at least four characteristic flanking residues that adapt the donor's pK (a) and polarize the substrate; and a negative electrostatic potential in the substrate‐binding site to stabilize the transition state. As additional catalytically relevant positions, we propose alternative proton donors in IREDs and βHADs as well as proton relays in IREDs, βHADs, and SDRs. The functional role of flanking residues was experimentally confirmed by alanine scanning of the imine‐reducing SDR from Zephyranthes treatiae. Mutating the “gatekeeping” phenylalanine at standard position 200 resulted in a tenfold increase in imine‐reducing activity. John Wiley and Sons Inc. 2020-05-29 2020-09-14 /pmc/articles/PMC7540600/ /pubmed/32311225 http://dx.doi.org/10.1002/cbic.202000213 Text en © 2020 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Full Papers Stockinger, Peter Roth, Sebastian Müller, Michael Pleiss, Jürgen Systematic Evaluation of Imine‐Reducing Enzymes: Common Principles in Imine Reductases, β‐Hydroxy Acid Dehydrogenases, and Short‐Chain Dehydrogenases/ Reductases |
title | Systematic Evaluation of Imine‐Reducing Enzymes: Common Principles in Imine Reductases, β‐Hydroxy Acid Dehydrogenases, and Short‐Chain Dehydrogenases/ Reductases |
title_full | Systematic Evaluation of Imine‐Reducing Enzymes: Common Principles in Imine Reductases, β‐Hydroxy Acid Dehydrogenases, and Short‐Chain Dehydrogenases/ Reductases |
title_fullStr | Systematic Evaluation of Imine‐Reducing Enzymes: Common Principles in Imine Reductases, β‐Hydroxy Acid Dehydrogenases, and Short‐Chain Dehydrogenases/ Reductases |
title_full_unstemmed | Systematic Evaluation of Imine‐Reducing Enzymes: Common Principles in Imine Reductases, β‐Hydroxy Acid Dehydrogenases, and Short‐Chain Dehydrogenases/ Reductases |
title_short | Systematic Evaluation of Imine‐Reducing Enzymes: Common Principles in Imine Reductases, β‐Hydroxy Acid Dehydrogenases, and Short‐Chain Dehydrogenases/ Reductases |
title_sort | systematic evaluation of imine‐reducing enzymes: common principles in imine reductases, β‐hydroxy acid dehydrogenases, and short‐chain dehydrogenases/ reductases |
topic | Full Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7540600/ https://www.ncbi.nlm.nih.gov/pubmed/32311225 http://dx.doi.org/10.1002/cbic.202000213 |
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