MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets

MassIVE.quant is a repository infrastructure and data resource for reproducible quantitative mass spectrometry-based proteomics, which is compatible with all mass spectrometry data acquisition types and computational analysis tools. A branch structure enables MassIVE.quant to systematically store ra...

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Autores principales: Choi, Meena, Carver, Jeremy, Chiva, Cristina, Tzouros, Manuel, Huang, Ting, Tsai, Tsung-Heng, Pullman, Benjamin, Bernhardt, Oliver M., Hüttenhain, Ruth, Teo, Guo Ci, Perez-Riverol, Yasset, Muntel, Jan, Müller, Maik, Goetze, Sandra, Pavlou, Maria, Verschueren, Erik, Wollscheid, Bernd, Nesvizhskii, Alexey I., Reiter, Lukas, Dunkley, Tom, Sabidó, Eduard, Bandeira, Nuno, Vitek, Olga
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2020
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7541731/
https://www.ncbi.nlm.nih.gov/pubmed/32929271
http://dx.doi.org/10.1038/s41592-020-0955-0
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author Choi, Meena
Carver, Jeremy
Chiva, Cristina
Tzouros, Manuel
Huang, Ting
Tsai, Tsung-Heng
Pullman, Benjamin
Bernhardt, Oliver M.
Hüttenhain, Ruth
Teo, Guo Ci
Perez-Riverol, Yasset
Muntel, Jan
Müller, Maik
Goetze, Sandra
Pavlou, Maria
Verschueren, Erik
Wollscheid, Bernd
Nesvizhskii, Alexey I.
Reiter, Lukas
Dunkley, Tom
Sabidó, Eduard
Bandeira, Nuno
Vitek, Olga
author_facet Choi, Meena
Carver, Jeremy
Chiva, Cristina
Tzouros, Manuel
Huang, Ting
Tsai, Tsung-Heng
Pullman, Benjamin
Bernhardt, Oliver M.
Hüttenhain, Ruth
Teo, Guo Ci
Perez-Riverol, Yasset
Muntel, Jan
Müller, Maik
Goetze, Sandra
Pavlou, Maria
Verschueren, Erik
Wollscheid, Bernd
Nesvizhskii, Alexey I.
Reiter, Lukas
Dunkley, Tom
Sabidó, Eduard
Bandeira, Nuno
Vitek, Olga
author_sort Choi, Meena
collection PubMed
description MassIVE.quant is a repository infrastructure and data resource for reproducible quantitative mass spectrometry-based proteomics, which is compatible with all mass spectrometry data acquisition types and computational analysis tools. A branch structure enables MassIVE.quant to systematically store raw experimental data, metadata of the experimental design, scripts of the quantitative analysis workflow, intermediate input and output files, as well as alternative reanalyses of the same dataset.
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spelling pubmed-75417312021-03-14 MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets Choi, Meena Carver, Jeremy Chiva, Cristina Tzouros, Manuel Huang, Ting Tsai, Tsung-Heng Pullman, Benjamin Bernhardt, Oliver M. Hüttenhain, Ruth Teo, Guo Ci Perez-Riverol, Yasset Muntel, Jan Müller, Maik Goetze, Sandra Pavlou, Maria Verschueren, Erik Wollscheid, Bernd Nesvizhskii, Alexey I. Reiter, Lukas Dunkley, Tom Sabidó, Eduard Bandeira, Nuno Vitek, Olga Nat Methods Article MassIVE.quant is a repository infrastructure and data resource for reproducible quantitative mass spectrometry-based proteomics, which is compatible with all mass spectrometry data acquisition types and computational analysis tools. A branch structure enables MassIVE.quant to systematically store raw experimental data, metadata of the experimental design, scripts of the quantitative analysis workflow, intermediate input and output files, as well as alternative reanalyses of the same dataset. 2020-09-14 2020-10 /pmc/articles/PMC7541731/ /pubmed/32929271 http://dx.doi.org/10.1038/s41592-020-0955-0 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Choi, Meena
Carver, Jeremy
Chiva, Cristina
Tzouros, Manuel
Huang, Ting
Tsai, Tsung-Heng
Pullman, Benjamin
Bernhardt, Oliver M.
Hüttenhain, Ruth
Teo, Guo Ci
Perez-Riverol, Yasset
Muntel, Jan
Müller, Maik
Goetze, Sandra
Pavlou, Maria
Verschueren, Erik
Wollscheid, Bernd
Nesvizhskii, Alexey I.
Reiter, Lukas
Dunkley, Tom
Sabidó, Eduard
Bandeira, Nuno
Vitek, Olga
MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets
title MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets
title_full MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets
title_fullStr MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets
title_full_unstemmed MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets
title_short MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets
title_sort massive.quant: a community resource of quantitative mass spectrometry-based proteomics datasets
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7541731/
https://www.ncbi.nlm.nih.gov/pubmed/32929271
http://dx.doi.org/10.1038/s41592-020-0955-0
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