Cargando…
Highly Multiplexed Label-Free Imaging Sensor for Accurate Quantification of Small-Molecule Binding Kinetics
[Image: see text] Investigating the binding interaction of small molecules to large ligands is a compelling task for the field of drug development, as well as agro-biotechnology, since a common trait of drugs and toxins is often a low molecular weight (MW). Here, we improve the limit of detection of...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2020
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7542848/ https://www.ncbi.nlm.nih.gov/pubmed/33043215 http://dx.doi.org/10.1021/acsomega.0c03708 |
_version_ | 1783591619076816896 |
---|---|
author | Chiodi, Elisa Marn, Allison M. Geib, Matthew T. Ekiz Kanik, Fulya Rejman, John AnKrapp, David Ünlü, M. Selim |
author_facet | Chiodi, Elisa Marn, Allison M. Geib, Matthew T. Ekiz Kanik, Fulya Rejman, John AnKrapp, David Ünlü, M. Selim |
author_sort | Chiodi, Elisa |
collection | PubMed |
description | [Image: see text] Investigating the binding interaction of small molecules to large ligands is a compelling task for the field of drug development, as well as agro-biotechnology, since a common trait of drugs and toxins is often a low molecular weight (MW). Here, we improve the limit of detection of the Interferometric Reflectance Imaging Sensor (IRIS), a label-free, highly multiplexed biosensor, to perform small-molecule screening. In this work, characterization of small molecules binding to immobilized probes in a microarray format is demonstrated, with a limit of detection of 1 pg/mm(2) in mass density. First, as a proof of concept to show the impact of spatial and temporal averaging on the system noise, detection of biotin (MW = 244.3 Da) binding to a streptavidin-functionalized chip is performed and the parameters are tuned to achieve maximum signal-to-noise ratio (SNR ≈ 34). The optimized system is then applied to the screening of a 20-multiplexed antibody chip against fumonisin B1 (MW = 721.8 Da), a mycotoxin found in cereal grains. The simultaneously recorded binding curves yield an SNR ≈ 8. Five out of twenty antibodies are also screened against the toxin in a lateral flow assay, obtaining consistent results. With the demonstrated noise characteristics, further sensitivity improvements are expected with the advancement of camera sensor technology. |
format | Online Article Text |
id | pubmed-7542848 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-75428482020-10-09 Highly Multiplexed Label-Free Imaging Sensor for Accurate Quantification of Small-Molecule Binding Kinetics Chiodi, Elisa Marn, Allison M. Geib, Matthew T. Ekiz Kanik, Fulya Rejman, John AnKrapp, David Ünlü, M. Selim ACS Omega [Image: see text] Investigating the binding interaction of small molecules to large ligands is a compelling task for the field of drug development, as well as agro-biotechnology, since a common trait of drugs and toxins is often a low molecular weight (MW). Here, we improve the limit of detection of the Interferometric Reflectance Imaging Sensor (IRIS), a label-free, highly multiplexed biosensor, to perform small-molecule screening. In this work, characterization of small molecules binding to immobilized probes in a microarray format is demonstrated, with a limit of detection of 1 pg/mm(2) in mass density. First, as a proof of concept to show the impact of spatial and temporal averaging on the system noise, detection of biotin (MW = 244.3 Da) binding to a streptavidin-functionalized chip is performed and the parameters are tuned to achieve maximum signal-to-noise ratio (SNR ≈ 34). The optimized system is then applied to the screening of a 20-multiplexed antibody chip against fumonisin B1 (MW = 721.8 Da), a mycotoxin found in cereal grains. The simultaneously recorded binding curves yield an SNR ≈ 8. Five out of twenty antibodies are also screened against the toxin in a lateral flow assay, obtaining consistent results. With the demonstrated noise characteristics, further sensitivity improvements are expected with the advancement of camera sensor technology. American Chemical Society 2020-09-25 /pmc/articles/PMC7542848/ /pubmed/33043215 http://dx.doi.org/10.1021/acsomega.0c03708 Text en This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Chiodi, Elisa Marn, Allison M. Geib, Matthew T. Ekiz Kanik, Fulya Rejman, John AnKrapp, David Ünlü, M. Selim Highly Multiplexed Label-Free Imaging Sensor for Accurate Quantification of Small-Molecule Binding Kinetics |
title | Highly Multiplexed Label-Free
Imaging Sensor for Accurate
Quantification of Small-Molecule Binding Kinetics |
title_full | Highly Multiplexed Label-Free
Imaging Sensor for Accurate
Quantification of Small-Molecule Binding Kinetics |
title_fullStr | Highly Multiplexed Label-Free
Imaging Sensor for Accurate
Quantification of Small-Molecule Binding Kinetics |
title_full_unstemmed | Highly Multiplexed Label-Free
Imaging Sensor for Accurate
Quantification of Small-Molecule Binding Kinetics |
title_short | Highly Multiplexed Label-Free
Imaging Sensor for Accurate
Quantification of Small-Molecule Binding Kinetics |
title_sort | highly multiplexed label-free
imaging sensor for accurate
quantification of small-molecule binding kinetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7542848/ https://www.ncbi.nlm.nih.gov/pubmed/33043215 http://dx.doi.org/10.1021/acsomega.0c03708 |
work_keys_str_mv | AT chiodielisa highlymultiplexedlabelfreeimagingsensorforaccuratequantificationofsmallmoleculebindingkinetics AT marnallisonm highlymultiplexedlabelfreeimagingsensorforaccuratequantificationofsmallmoleculebindingkinetics AT geibmatthewt highlymultiplexedlabelfreeimagingsensorforaccuratequantificationofsmallmoleculebindingkinetics AT ekizkanikfulya highlymultiplexedlabelfreeimagingsensorforaccuratequantificationofsmallmoleculebindingkinetics AT rejmanjohn highlymultiplexedlabelfreeimagingsensorforaccuratequantificationofsmallmoleculebindingkinetics AT ankrappdavid highlymultiplexedlabelfreeimagingsensorforaccuratequantificationofsmallmoleculebindingkinetics AT unlumselim highlymultiplexedlabelfreeimagingsensorforaccuratequantificationofsmallmoleculebindingkinetics |