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Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images

The recent global outbreak and spread of coronavirus disease (COVID-19) makes it an imperative to develop accurate and efficient diagnostic tools for the disease as medical resources are getting increasingly constrained. Artificial intelligence (AI)-aided tools have exhibited desirable potential; fo...

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Detalles Bibliográficos
Autores principales: Gao, Kai, Su, Jianpo, Jiang, Zhongbiao, Zeng, Ling-Li, Feng, Zhichao, Shen, Hui, Rong, Pengfei, Xu, Xin, Qin, Jian, Yang, Yuexiang, Wang, Wei, Hu, Dewen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7543739/
https://www.ncbi.nlm.nih.gov/pubmed/33129141
http://dx.doi.org/10.1016/j.media.2020.101836
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author Gao, Kai
Su, Jianpo
Jiang, Zhongbiao
Zeng, Ling-Li
Feng, Zhichao
Shen, Hui
Rong, Pengfei
Xu, Xin
Qin, Jian
Yang, Yuexiang
Wang, Wei
Hu, Dewen
author_facet Gao, Kai
Su, Jianpo
Jiang, Zhongbiao
Zeng, Ling-Li
Feng, Zhichao
Shen, Hui
Rong, Pengfei
Xu, Xin
Qin, Jian
Yang, Yuexiang
Wang, Wei
Hu, Dewen
author_sort Gao, Kai
collection PubMed
description The recent global outbreak and spread of coronavirus disease (COVID-19) makes it an imperative to develop accurate and efficient diagnostic tools for the disease as medical resources are getting increasingly constrained. Artificial intelligence (AI)-aided tools have exhibited desirable potential; for example, chest computed tomography (CT) has been demonstrated to play a major role in the diagnosis and evaluation of COVID-19. However, developing a CT-based AI diagnostic system for the disease detection has faced considerable challenges, which is mainly due to the lack of adequate manually-delineated samples for training, as well as the requirement of sufficient sensitivity to subtle lesions in the early infection stages. In this study, we developed a dual-branch combination network (DCN) for COVID-19 diagnosis that can simultaneously achieve individual-level classification and lesion segmentation. To focus the classification branch more intensively on the lesion areas, a novel lesion attention module was developed to integrate the intermediate segmentation results. Furthermore, to manage the potential influence of different imaging parameters from individual facilities, a slice probability mapping method was proposed to learn the transformation from slice-level to individual-level classification. We conducted experiments on a large dataset of 1202 subjects from ten institutes in China. The results demonstrated that 1) the proposed DCN attained a classification accuracy of 96.74% on the internal dataset and 92.87% on the external validation dataset, thereby outperforming other models; 2) DCN obtained comparable performance with fewer samples and exhibited higher sensitivity, especially in subtle lesion detection; and 3) DCN provided good interpretability on the loci of infection compared to other deep models due to its classification guided by high-level semantic information. An online CT-based diagnostic platform for COVID-19 derived from our proposed framework is now available.
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spelling pubmed-75437392020-10-09 Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images Gao, Kai Su, Jianpo Jiang, Zhongbiao Zeng, Ling-Li Feng, Zhichao Shen, Hui Rong, Pengfei Xu, Xin Qin, Jian Yang, Yuexiang Wang, Wei Hu, Dewen Med Image Anal Article The recent global outbreak and spread of coronavirus disease (COVID-19) makes it an imperative to develop accurate and efficient diagnostic tools for the disease as medical resources are getting increasingly constrained. Artificial intelligence (AI)-aided tools have exhibited desirable potential; for example, chest computed tomography (CT) has been demonstrated to play a major role in the diagnosis and evaluation of COVID-19. However, developing a CT-based AI diagnostic system for the disease detection has faced considerable challenges, which is mainly due to the lack of adequate manually-delineated samples for training, as well as the requirement of sufficient sensitivity to subtle lesions in the early infection stages. In this study, we developed a dual-branch combination network (DCN) for COVID-19 diagnosis that can simultaneously achieve individual-level classification and lesion segmentation. To focus the classification branch more intensively on the lesion areas, a novel lesion attention module was developed to integrate the intermediate segmentation results. Furthermore, to manage the potential influence of different imaging parameters from individual facilities, a slice probability mapping method was proposed to learn the transformation from slice-level to individual-level classification. We conducted experiments on a large dataset of 1202 subjects from ten institutes in China. The results demonstrated that 1) the proposed DCN attained a classification accuracy of 96.74% on the internal dataset and 92.87% on the external validation dataset, thereby outperforming other models; 2) DCN obtained comparable performance with fewer samples and exhibited higher sensitivity, especially in subtle lesion detection; and 3) DCN provided good interpretability on the loci of infection compared to other deep models due to its classification guided by high-level semantic information. An online CT-based diagnostic platform for COVID-19 derived from our proposed framework is now available. Elsevier B.V. 2021-01 2020-10-08 /pmc/articles/PMC7543739/ /pubmed/33129141 http://dx.doi.org/10.1016/j.media.2020.101836 Text en © 2020 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Gao, Kai
Su, Jianpo
Jiang, Zhongbiao
Zeng, Ling-Li
Feng, Zhichao
Shen, Hui
Rong, Pengfei
Xu, Xin
Qin, Jian
Yang, Yuexiang
Wang, Wei
Hu, Dewen
Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images
title Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images
title_full Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images
title_fullStr Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images
title_full_unstemmed Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images
title_short Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images
title_sort dual-branch combination network (dcn): towards accurate diagnosis and lesion segmentation of covid-19 using ct images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7543739/
https://www.ncbi.nlm.nih.gov/pubmed/33129141
http://dx.doi.org/10.1016/j.media.2020.101836
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