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Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images
The recent global outbreak and spread of coronavirus disease (COVID-19) makes it an imperative to develop accurate and efficient diagnostic tools for the disease as medical resources are getting increasingly constrained. Artificial intelligence (AI)-aided tools have exhibited desirable potential; fo...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier B.V.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7543739/ https://www.ncbi.nlm.nih.gov/pubmed/33129141 http://dx.doi.org/10.1016/j.media.2020.101836 |
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author | Gao, Kai Su, Jianpo Jiang, Zhongbiao Zeng, Ling-Li Feng, Zhichao Shen, Hui Rong, Pengfei Xu, Xin Qin, Jian Yang, Yuexiang Wang, Wei Hu, Dewen |
author_facet | Gao, Kai Su, Jianpo Jiang, Zhongbiao Zeng, Ling-Li Feng, Zhichao Shen, Hui Rong, Pengfei Xu, Xin Qin, Jian Yang, Yuexiang Wang, Wei Hu, Dewen |
author_sort | Gao, Kai |
collection | PubMed |
description | The recent global outbreak and spread of coronavirus disease (COVID-19) makes it an imperative to develop accurate and efficient diagnostic tools for the disease as medical resources are getting increasingly constrained. Artificial intelligence (AI)-aided tools have exhibited desirable potential; for example, chest computed tomography (CT) has been demonstrated to play a major role in the diagnosis and evaluation of COVID-19. However, developing a CT-based AI diagnostic system for the disease detection has faced considerable challenges, which is mainly due to the lack of adequate manually-delineated samples for training, as well as the requirement of sufficient sensitivity to subtle lesions in the early infection stages. In this study, we developed a dual-branch combination network (DCN) for COVID-19 diagnosis that can simultaneously achieve individual-level classification and lesion segmentation. To focus the classification branch more intensively on the lesion areas, a novel lesion attention module was developed to integrate the intermediate segmentation results. Furthermore, to manage the potential influence of different imaging parameters from individual facilities, a slice probability mapping method was proposed to learn the transformation from slice-level to individual-level classification. We conducted experiments on a large dataset of 1202 subjects from ten institutes in China. The results demonstrated that 1) the proposed DCN attained a classification accuracy of 96.74% on the internal dataset and 92.87% on the external validation dataset, thereby outperforming other models; 2) DCN obtained comparable performance with fewer samples and exhibited higher sensitivity, especially in subtle lesion detection; and 3) DCN provided good interpretability on the loci of infection compared to other deep models due to its classification guided by high-level semantic information. An online CT-based diagnostic platform for COVID-19 derived from our proposed framework is now available. |
format | Online Article Text |
id | pubmed-7543739 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier B.V. |
record_format | MEDLINE/PubMed |
spelling | pubmed-75437392020-10-09 Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images Gao, Kai Su, Jianpo Jiang, Zhongbiao Zeng, Ling-Li Feng, Zhichao Shen, Hui Rong, Pengfei Xu, Xin Qin, Jian Yang, Yuexiang Wang, Wei Hu, Dewen Med Image Anal Article The recent global outbreak and spread of coronavirus disease (COVID-19) makes it an imperative to develop accurate and efficient diagnostic tools for the disease as medical resources are getting increasingly constrained. Artificial intelligence (AI)-aided tools have exhibited desirable potential; for example, chest computed tomography (CT) has been demonstrated to play a major role in the diagnosis and evaluation of COVID-19. However, developing a CT-based AI diagnostic system for the disease detection has faced considerable challenges, which is mainly due to the lack of adequate manually-delineated samples for training, as well as the requirement of sufficient sensitivity to subtle lesions in the early infection stages. In this study, we developed a dual-branch combination network (DCN) for COVID-19 diagnosis that can simultaneously achieve individual-level classification and lesion segmentation. To focus the classification branch more intensively on the lesion areas, a novel lesion attention module was developed to integrate the intermediate segmentation results. Furthermore, to manage the potential influence of different imaging parameters from individual facilities, a slice probability mapping method was proposed to learn the transformation from slice-level to individual-level classification. We conducted experiments on a large dataset of 1202 subjects from ten institutes in China. The results demonstrated that 1) the proposed DCN attained a classification accuracy of 96.74% on the internal dataset and 92.87% on the external validation dataset, thereby outperforming other models; 2) DCN obtained comparable performance with fewer samples and exhibited higher sensitivity, especially in subtle lesion detection; and 3) DCN provided good interpretability on the loci of infection compared to other deep models due to its classification guided by high-level semantic information. An online CT-based diagnostic platform for COVID-19 derived from our proposed framework is now available. Elsevier B.V. 2021-01 2020-10-08 /pmc/articles/PMC7543739/ /pubmed/33129141 http://dx.doi.org/10.1016/j.media.2020.101836 Text en © 2020 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Gao, Kai Su, Jianpo Jiang, Zhongbiao Zeng, Ling-Li Feng, Zhichao Shen, Hui Rong, Pengfei Xu, Xin Qin, Jian Yang, Yuexiang Wang, Wei Hu, Dewen Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images |
title | Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images |
title_full | Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images |
title_fullStr | Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images |
title_full_unstemmed | Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images |
title_short | Dual-branch combination network (DCN): Towards accurate diagnosis and lesion segmentation of COVID-19 using CT images |
title_sort | dual-branch combination network (dcn): towards accurate diagnosis and lesion segmentation of covid-19 using ct images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7543739/ https://www.ncbi.nlm.nih.gov/pubmed/33129141 http://dx.doi.org/10.1016/j.media.2020.101836 |
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