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eIF4G-driven translation initiation of downstream ORFs in mammalian cells
Comprehensive genome-wide analysis has revealed the presence of translational elements in the 3′ untranslated regions (UTRs) of human transcripts. However, the mechanisms by which translation is initiated in 3′ UTRs and the physiological function of their products remain unclear. This study showed t...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7544200/ https://www.ncbi.nlm.nih.gov/pubmed/32941651 http://dx.doi.org/10.1093/nar/gkaa728 |
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author | Nobuta, Risa Machida, Kodai Sato, Misaki Hashimoto, Satoshi Toriumi, Yasuhito Nakajima, Shizuka Suto, Daiki Imataka, Hiroaki Inada, Toshifumi |
author_facet | Nobuta, Risa Machida, Kodai Sato, Misaki Hashimoto, Satoshi Toriumi, Yasuhito Nakajima, Shizuka Suto, Daiki Imataka, Hiroaki Inada, Toshifumi |
author_sort | Nobuta, Risa |
collection | PubMed |
description | Comprehensive genome-wide analysis has revealed the presence of translational elements in the 3′ untranslated regions (UTRs) of human transcripts. However, the mechanisms by which translation is initiated in 3′ UTRs and the physiological function of their products remain unclear. This study showed that eIF4G drives the translation of various downstream open reading frames (dORFs) in 3′ UTRs. The 3′ UTR of GCH1, which encodes GTP cyclohydrolase 1, contains an internal ribosome entry site (IRES) that initiates the translation of dORFs. An in vitro reconstituted translation system showed that the IRES in the 3′ UTR of GCH1 required eIF4G and conventional translation initiation factors, except eIF4E, for AUG-initiated translation of dORFs. The 3′ UTR of GCH1-mediated translation was resistant to the mTOR inhibitor Torin 1, which inhibits cap-dependent initiation by increasing eIF4E-unbound eIF4G. eIF4G was also required for the activity of various elements, including polyU and poliovirus type 2, a short element thought to recruit ribosomes by base-pairing with 18S rRNA. These findings indicate that eIF4G mediates translation initiation of various ORFs in mammalian cells, suggesting that the 3′ UTRs of mRNAs may encode various products. |
format | Online Article Text |
id | pubmed-7544200 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-75442002020-10-15 eIF4G-driven translation initiation of downstream ORFs in mammalian cells Nobuta, Risa Machida, Kodai Sato, Misaki Hashimoto, Satoshi Toriumi, Yasuhito Nakajima, Shizuka Suto, Daiki Imataka, Hiroaki Inada, Toshifumi Nucleic Acids Res RNA and RNA-protein complexes Comprehensive genome-wide analysis has revealed the presence of translational elements in the 3′ untranslated regions (UTRs) of human transcripts. However, the mechanisms by which translation is initiated in 3′ UTRs and the physiological function of their products remain unclear. This study showed that eIF4G drives the translation of various downstream open reading frames (dORFs) in 3′ UTRs. The 3′ UTR of GCH1, which encodes GTP cyclohydrolase 1, contains an internal ribosome entry site (IRES) that initiates the translation of dORFs. An in vitro reconstituted translation system showed that the IRES in the 3′ UTR of GCH1 required eIF4G and conventional translation initiation factors, except eIF4E, for AUG-initiated translation of dORFs. The 3′ UTR of GCH1-mediated translation was resistant to the mTOR inhibitor Torin 1, which inhibits cap-dependent initiation by increasing eIF4E-unbound eIF4G. eIF4G was also required for the activity of various elements, including polyU and poliovirus type 2, a short element thought to recruit ribosomes by base-pairing with 18S rRNA. These findings indicate that eIF4G mediates translation initiation of various ORFs in mammalian cells, suggesting that the 3′ UTRs of mRNAs may encode various products. Oxford University Press 2020-09-17 /pmc/articles/PMC7544200/ /pubmed/32941651 http://dx.doi.org/10.1093/nar/gkaa728 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | RNA and RNA-protein complexes Nobuta, Risa Machida, Kodai Sato, Misaki Hashimoto, Satoshi Toriumi, Yasuhito Nakajima, Shizuka Suto, Daiki Imataka, Hiroaki Inada, Toshifumi eIF4G-driven translation initiation of downstream ORFs in mammalian cells |
title | eIF4G-driven translation initiation of downstream ORFs in mammalian cells |
title_full | eIF4G-driven translation initiation of downstream ORFs in mammalian cells |
title_fullStr | eIF4G-driven translation initiation of downstream ORFs in mammalian cells |
title_full_unstemmed | eIF4G-driven translation initiation of downstream ORFs in mammalian cells |
title_short | eIF4G-driven translation initiation of downstream ORFs in mammalian cells |
title_sort | eif4g-driven translation initiation of downstream orfs in mammalian cells |
topic | RNA and RNA-protein complexes |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7544200/ https://www.ncbi.nlm.nih.gov/pubmed/32941651 http://dx.doi.org/10.1093/nar/gkaa728 |
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