Metagenomics of Wastewater Influent from Southern California Wastewater Treatment Facilities in the Era of COVID-19

Sequencing wastewater may be useful for detecting pathogens and assaying microbial water quality. We concentrated, extracted, and sequenced nucleic acids from 17 composite influent wastewater samples spanning seven southern California wastewater treatment facilities in May 2020. Bacteria were the mo...

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Autores principales: Rothman, Jason A., Loveless, Theresa B., Griffith, Madison L., Steele, Joshua A., Griffith, John F., Whiteson, Katrine L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Omics Data Sets
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7545286/
https://www.ncbi.nlm.nih.gov/pubmed/33033132
http://dx.doi.org/10.1128/MRA.00907-20
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author Rothman, Jason A.
Loveless, Theresa B.
Griffith, Madison L.
Steele, Joshua A.
Griffith, John F.
Whiteson, Katrine L.
author_facet Rothman, Jason A.
Loveless, Theresa B.
Griffith, Madison L.
Steele, Joshua A.
Griffith, John F.
Whiteson, Katrine L.
author_sort Rothman, Jason A.
collection PubMed
description Sequencing wastewater may be useful for detecting pathogens and assaying microbial water quality. We concentrated, extracted, and sequenced nucleic acids from 17 composite influent wastewater samples spanning seven southern California wastewater treatment facilities in May 2020. Bacteria were the most proportionally abundant taxonomic group present, followed by viruses and archaea.
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spelling pubmed-75452862020-10-27 Metagenomics of Wastewater Influent from Southern California Wastewater Treatment Facilities in the Era of COVID-19 Rothman, Jason A. Loveless, Theresa B. Griffith, Madison L. Steele, Joshua A. Griffith, John F. Whiteson, Katrine L. Microbiol Resour Announc Omics Data Sets Sequencing wastewater may be useful for detecting pathogens and assaying microbial water quality. We concentrated, extracted, and sequenced nucleic acids from 17 composite influent wastewater samples spanning seven southern California wastewater treatment facilities in May 2020. Bacteria were the most proportionally abundant taxonomic group present, followed by viruses and archaea. American Society for Microbiology 2020-10-08 /pmc/articles/PMC7545286/ /pubmed/33033132 http://dx.doi.org/10.1128/MRA.00907-20 Text en Copyright © 2020 Rothman et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Omics Data Sets
Rothman, Jason A.
Loveless, Theresa B.
Griffith, Madison L.
Steele, Joshua A.
Griffith, John F.
Whiteson, Katrine L.
Metagenomics of Wastewater Influent from Southern California Wastewater Treatment Facilities in the Era of COVID-19
title Metagenomics of Wastewater Influent from Southern California Wastewater Treatment Facilities in the Era of COVID-19
title_full Metagenomics of Wastewater Influent from Southern California Wastewater Treatment Facilities in the Era of COVID-19
title_fullStr Metagenomics of Wastewater Influent from Southern California Wastewater Treatment Facilities in the Era of COVID-19
title_full_unstemmed Metagenomics of Wastewater Influent from Southern California Wastewater Treatment Facilities in the Era of COVID-19
title_short Metagenomics of Wastewater Influent from Southern California Wastewater Treatment Facilities in the Era of COVID-19
title_sort metagenomics of wastewater influent from southern california wastewater treatment facilities in the era of covid-19
topic Omics Data Sets
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7545286/
https://www.ncbi.nlm.nih.gov/pubmed/33033132
http://dx.doi.org/10.1128/MRA.00907-20
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