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Low-Rank Representation of Head Impact Kinematics: A Data-Driven Emulator

Head motion induced by impacts has been deemed as one of the most important measures in brain injury prediction, given that the vast majority of brain injury metrics use head kinematics as input. Recently, researchers have focused on using fast approaches, such as machine learning, to approximate br...

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Autores principales: Arrué, Patricio, Toosizadeh, Nima, Babaee, Hessam, Laksari, Kaveh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7546353/
https://www.ncbi.nlm.nih.gov/pubmed/33102454
http://dx.doi.org/10.3389/fbioe.2020.555493
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author Arrué, Patricio
Toosizadeh, Nima
Babaee, Hessam
Laksari, Kaveh
author_facet Arrué, Patricio
Toosizadeh, Nima
Babaee, Hessam
Laksari, Kaveh
author_sort Arrué, Patricio
collection PubMed
description Head motion induced by impacts has been deemed as one of the most important measures in brain injury prediction, given that the vast majority of brain injury metrics use head kinematics as input. Recently, researchers have focused on using fast approaches, such as machine learning, to approximate brain deformation in real time for early brain injury diagnosis. However, training such models requires large number of kinematic measurements, and therefore data augmentation is required given the limited on-field measured data available. In this study we present a principal component analysis-based method that emulates an empirical low-rank substitution for head impact kinematics, while requiring low computational cost. In characterizing our existing data set of 537 head impacts, each consisting of 6 degrees of freedom measurements, we found that only a few modes, e.g., 15 in the case of angular velocity, is sufficient for accurate reconstruction of the entire data set. Furthermore, these modes are predominantly low frequency since over 70% of the angular velocity response can be captured by modes that have frequencies under 40 Hz. We compared our proposed method against existing impact parametrization methods and showed significantly better performance in injury prediction using a range of kinematic-based metrics—such as head injury criterion (HIC), rotational injury criterion (RIC), and brain injury metric (BrIC)—and brain tissue deformation-based metrics—such as brain angle metric (BAM), maximum principal strain (MPS), and axonal fiber strains (FS). In all cases, our approach reproduced injury metrics similar to the ground truth measurements with no significant difference, whereas the existing methods obtained significantly different (p < 0.01) values as well as substantial differences in injury classification sensitivity and specificity. This emulator will enable us to provide the necessary data augmentation to build a head impact kinematic data set of any size. The emulator and corresponding examples are available on our website.
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spelling pubmed-75463532020-10-22 Low-Rank Representation of Head Impact Kinematics: A Data-Driven Emulator Arrué, Patricio Toosizadeh, Nima Babaee, Hessam Laksari, Kaveh Front Bioeng Biotechnol Bioengineering and Biotechnology Head motion induced by impacts has been deemed as one of the most important measures in brain injury prediction, given that the vast majority of brain injury metrics use head kinematics as input. Recently, researchers have focused on using fast approaches, such as machine learning, to approximate brain deformation in real time for early brain injury diagnosis. However, training such models requires large number of kinematic measurements, and therefore data augmentation is required given the limited on-field measured data available. In this study we present a principal component analysis-based method that emulates an empirical low-rank substitution for head impact kinematics, while requiring low computational cost. In characterizing our existing data set of 537 head impacts, each consisting of 6 degrees of freedom measurements, we found that only a few modes, e.g., 15 in the case of angular velocity, is sufficient for accurate reconstruction of the entire data set. Furthermore, these modes are predominantly low frequency since over 70% of the angular velocity response can be captured by modes that have frequencies under 40 Hz. We compared our proposed method against existing impact parametrization methods and showed significantly better performance in injury prediction using a range of kinematic-based metrics—such as head injury criterion (HIC), rotational injury criterion (RIC), and brain injury metric (BrIC)—and brain tissue deformation-based metrics—such as brain angle metric (BAM), maximum principal strain (MPS), and axonal fiber strains (FS). In all cases, our approach reproduced injury metrics similar to the ground truth measurements with no significant difference, whereas the existing methods obtained significantly different (p < 0.01) values as well as substantial differences in injury classification sensitivity and specificity. This emulator will enable us to provide the necessary data augmentation to build a head impact kinematic data set of any size. The emulator and corresponding examples are available on our website. Frontiers Media S.A. 2020-09-25 /pmc/articles/PMC7546353/ /pubmed/33102454 http://dx.doi.org/10.3389/fbioe.2020.555493 Text en Copyright © 2020 Arrué, Toosizadeh, Babaee and Laksari. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioengineering and Biotechnology
Arrué, Patricio
Toosizadeh, Nima
Babaee, Hessam
Laksari, Kaveh
Low-Rank Representation of Head Impact Kinematics: A Data-Driven Emulator
title Low-Rank Representation of Head Impact Kinematics: A Data-Driven Emulator
title_full Low-Rank Representation of Head Impact Kinematics: A Data-Driven Emulator
title_fullStr Low-Rank Representation of Head Impact Kinematics: A Data-Driven Emulator
title_full_unstemmed Low-Rank Representation of Head Impact Kinematics: A Data-Driven Emulator
title_short Low-Rank Representation of Head Impact Kinematics: A Data-Driven Emulator
title_sort low-rank representation of head impact kinematics: a data-driven emulator
topic Bioengineering and Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7546353/
https://www.ncbi.nlm.nih.gov/pubmed/33102454
http://dx.doi.org/10.3389/fbioe.2020.555493
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