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Genome sequencing data for wild and cultivated bananas, plantains and abacá

We performed shotgun genome sequencing on a total of 19 different Musa genotypes including representatives of wild banana species Musa acuminata and M. balibisiana, allopolyploid bananas and plantains, Fe'i banana, pink banana (also known as hairy banana) and abacá (also known as hemp banana)....

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Autores principales: Sambles, Christine, Venkatesan, Lakshmipriya, Shittu, Olanrewaju M., Harrison, James, Moore, Karen, Tripathi, Leena, Grant, Murray, Warmington, Rachel, Studholme, David J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7549061/
https://www.ncbi.nlm.nih.gov/pubmed/33072825
http://dx.doi.org/10.1016/j.dib.2020.106341
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author Sambles, Christine
Venkatesan, Lakshmipriya
Shittu, Olanrewaju M.
Harrison, James
Moore, Karen
Tripathi, Leena
Grant, Murray
Warmington, Rachel
Studholme, David J.
author_facet Sambles, Christine
Venkatesan, Lakshmipriya
Shittu, Olanrewaju M.
Harrison, James
Moore, Karen
Tripathi, Leena
Grant, Murray
Warmington, Rachel
Studholme, David J.
author_sort Sambles, Christine
collection PubMed
description We performed shotgun genome sequencing on a total of 19 different Musa genotypes including representatives of wild banana species Musa acuminata and M. balibisiana, allopolyploid bananas and plantains, Fe'i banana, pink banana (also known as hairy banana) and abacá (also known as hemp banana). We aligned sequence reads against a previously sequenced reference genome and assessed ploidy and, in the case of allopolyploids, the contributions of the A and B genomes; this provides important quality-assurance data about the taxonomic identities of the sequenced plant material. These data will be useful for phylogenetics, crop improvement, studies of the complex story of intergenomic recombination in AAB and ABB allotriploid bananas and plantains and can be integrated into resources such as the Banana Genome Hub.
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spelling pubmed-75490612020-10-16 Genome sequencing data for wild and cultivated bananas, plantains and abacá Sambles, Christine Venkatesan, Lakshmipriya Shittu, Olanrewaju M. Harrison, James Moore, Karen Tripathi, Leena Grant, Murray Warmington, Rachel Studholme, David J. Data Brief Data Article We performed shotgun genome sequencing on a total of 19 different Musa genotypes including representatives of wild banana species Musa acuminata and M. balibisiana, allopolyploid bananas and plantains, Fe'i banana, pink banana (also known as hairy banana) and abacá (also known as hemp banana). We aligned sequence reads against a previously sequenced reference genome and assessed ploidy and, in the case of allopolyploids, the contributions of the A and B genomes; this provides important quality-assurance data about the taxonomic identities of the sequenced plant material. These data will be useful for phylogenetics, crop improvement, studies of the complex story of intergenomic recombination in AAB and ABB allotriploid bananas and plantains and can be integrated into resources such as the Banana Genome Hub. Elsevier 2020-09-23 /pmc/articles/PMC7549061/ /pubmed/33072825 http://dx.doi.org/10.1016/j.dib.2020.106341 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Sambles, Christine
Venkatesan, Lakshmipriya
Shittu, Olanrewaju M.
Harrison, James
Moore, Karen
Tripathi, Leena
Grant, Murray
Warmington, Rachel
Studholme, David J.
Genome sequencing data for wild and cultivated bananas, plantains and abacá
title Genome sequencing data for wild and cultivated bananas, plantains and abacá
title_full Genome sequencing data for wild and cultivated bananas, plantains and abacá
title_fullStr Genome sequencing data for wild and cultivated bananas, plantains and abacá
title_full_unstemmed Genome sequencing data for wild and cultivated bananas, plantains and abacá
title_short Genome sequencing data for wild and cultivated bananas, plantains and abacá
title_sort genome sequencing data for wild and cultivated bananas, plantains and abacá
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7549061/
https://www.ncbi.nlm.nih.gov/pubmed/33072825
http://dx.doi.org/10.1016/j.dib.2020.106341
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