Cargando…
Analysis of rare variants of autosomal‐dominant genes in a Chinese population with sporadic Parkinson’s disease
BACKGROUND: To date, several studies have suggested that genes involved in monogenic forms of Parkinson's disease (PD) contribute to unrelated sporadic cases, but there is limited evidence in the Chinese population. METHODS: We performed a systematic analysis of 12 autosomal‐dominant PD (AD‐PD)...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7549569/ https://www.ncbi.nlm.nih.gov/pubmed/32794657 http://dx.doi.org/10.1002/mgg3.1449 |
_version_ | 1783592819402735616 |
---|---|
author | Zheng, Ran Jin, Chong‐Yao Chen, Ying Ruan, Yang Gao, Ting Lin, Zhi‐Hao Dong, Jia‐Xian Yan, Ya‐Ping Tian, Jun Pu, Jia‐Li Zhang, Bao‐Rong |
author_facet | Zheng, Ran Jin, Chong‐Yao Chen, Ying Ruan, Yang Gao, Ting Lin, Zhi‐Hao Dong, Jia‐Xian Yan, Ya‐Ping Tian, Jun Pu, Jia‐Li Zhang, Bao‐Rong |
author_sort | Zheng, Ran |
collection | PubMed |
description | BACKGROUND: To date, several studies have suggested that genes involved in monogenic forms of Parkinson's disease (PD) contribute to unrelated sporadic cases, but there is limited evidence in the Chinese population. METHODS: We performed a systematic analysis of 12 autosomal‐dominant PD (AD‐PD) genes (SNCA, LRRK2, GIGYF2, VPS35, EIF4G1, DNAJC13, CHCHD2, HTRA2, NR4A2, RIC3, TMEM230, and UCHL1) using panel sequencing and database filtration in a case‐control study of a cohort of 391 Chinese sporadic PD patients and unrelated controls. We evaluated the association between candidate variants and sporadic PD using gene‐based analysis. RESULTS: Overall, 18 rare variants were discovered in 18.8% (36/191) of the index patients. In addition to previously reported pathogenic mutations (LRRK2 p.Arg1441His and p.Ala419Val), another four unknown variants were found in LRRK2, which also contribute to PD risk (p = 0.002; odds ratio (OR) = 7.83, 95% confidence intervals (CI) = 1.76–34.93). The cumulative frequency of undetermined rare variants was significantly higher in PD patients (14.1%) than in controls (3.5%) (p = 0.0002; OR=4.54, 95% CI = 1.93‐10.69). CONCLUSION: Our results confirm the strong impact of LRRK2 on the risk of sporadic PD, and also provide considerable evidence of the existence of additional undetermined rare variants in AD‐PD genes that contribute to the genetic etiology of sporadic PD in a Chinese cohort. |
format | Online Article Text |
id | pubmed-7549569 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-75495692020-10-19 Analysis of rare variants of autosomal‐dominant genes in a Chinese population with sporadic Parkinson’s disease Zheng, Ran Jin, Chong‐Yao Chen, Ying Ruan, Yang Gao, Ting Lin, Zhi‐Hao Dong, Jia‐Xian Yan, Ya‐Ping Tian, Jun Pu, Jia‐Li Zhang, Bao‐Rong Mol Genet Genomic Med Original Articles BACKGROUND: To date, several studies have suggested that genes involved in monogenic forms of Parkinson's disease (PD) contribute to unrelated sporadic cases, but there is limited evidence in the Chinese population. METHODS: We performed a systematic analysis of 12 autosomal‐dominant PD (AD‐PD) genes (SNCA, LRRK2, GIGYF2, VPS35, EIF4G1, DNAJC13, CHCHD2, HTRA2, NR4A2, RIC3, TMEM230, and UCHL1) using panel sequencing and database filtration in a case‐control study of a cohort of 391 Chinese sporadic PD patients and unrelated controls. We evaluated the association between candidate variants and sporadic PD using gene‐based analysis. RESULTS: Overall, 18 rare variants were discovered in 18.8% (36/191) of the index patients. In addition to previously reported pathogenic mutations (LRRK2 p.Arg1441His and p.Ala419Val), another four unknown variants were found in LRRK2, which also contribute to PD risk (p = 0.002; odds ratio (OR) = 7.83, 95% confidence intervals (CI) = 1.76–34.93). The cumulative frequency of undetermined rare variants was significantly higher in PD patients (14.1%) than in controls (3.5%) (p = 0.0002; OR=4.54, 95% CI = 1.93‐10.69). CONCLUSION: Our results confirm the strong impact of LRRK2 on the risk of sporadic PD, and also provide considerable evidence of the existence of additional undetermined rare variants in AD‐PD genes that contribute to the genetic etiology of sporadic PD in a Chinese cohort. John Wiley and Sons Inc. 2020-08-14 /pmc/articles/PMC7549569/ /pubmed/32794657 http://dx.doi.org/10.1002/mgg3.1449 Text en © 2020 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals LLC. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Zheng, Ran Jin, Chong‐Yao Chen, Ying Ruan, Yang Gao, Ting Lin, Zhi‐Hao Dong, Jia‐Xian Yan, Ya‐Ping Tian, Jun Pu, Jia‐Li Zhang, Bao‐Rong Analysis of rare variants of autosomal‐dominant genes in a Chinese population with sporadic Parkinson’s disease |
title | Analysis of rare variants of autosomal‐dominant genes in a Chinese population with sporadic Parkinson’s disease |
title_full | Analysis of rare variants of autosomal‐dominant genes in a Chinese population with sporadic Parkinson’s disease |
title_fullStr | Analysis of rare variants of autosomal‐dominant genes in a Chinese population with sporadic Parkinson’s disease |
title_full_unstemmed | Analysis of rare variants of autosomal‐dominant genes in a Chinese population with sporadic Parkinson’s disease |
title_short | Analysis of rare variants of autosomal‐dominant genes in a Chinese population with sporadic Parkinson’s disease |
title_sort | analysis of rare variants of autosomal‐dominant genes in a chinese population with sporadic parkinson’s disease |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7549569/ https://www.ncbi.nlm.nih.gov/pubmed/32794657 http://dx.doi.org/10.1002/mgg3.1449 |
work_keys_str_mv | AT zhengran analysisofrarevariantsofautosomaldominantgenesinachinesepopulationwithsporadicparkinsonsdisease AT jinchongyao analysisofrarevariantsofautosomaldominantgenesinachinesepopulationwithsporadicparkinsonsdisease AT chenying analysisofrarevariantsofautosomaldominantgenesinachinesepopulationwithsporadicparkinsonsdisease AT ruanyang analysisofrarevariantsofautosomaldominantgenesinachinesepopulationwithsporadicparkinsonsdisease AT gaoting analysisofrarevariantsofautosomaldominantgenesinachinesepopulationwithsporadicparkinsonsdisease AT linzhihao analysisofrarevariantsofautosomaldominantgenesinachinesepopulationwithsporadicparkinsonsdisease AT dongjiaxian analysisofrarevariantsofautosomaldominantgenesinachinesepopulationwithsporadicparkinsonsdisease AT yanyaping analysisofrarevariantsofautosomaldominantgenesinachinesepopulationwithsporadicparkinsonsdisease AT tianjun analysisofrarevariantsofautosomaldominantgenesinachinesepopulationwithsporadicparkinsonsdisease AT pujiali analysisofrarevariantsofautosomaldominantgenesinachinesepopulationwithsporadicparkinsonsdisease AT zhangbaorong analysisofrarevariantsofautosomaldominantgenesinachinesepopulationwithsporadicparkinsonsdisease |