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Observation of nucleic acids inside living human cells by in-cell NMR spectroscopy

The intracellular environment is highly crowded with biomacromolecules such as proteins and nucleic acids. Under such conditions, the structural and biophysical features of nucleic acids have been thought to be different from those in vitro. To obtain high-resolution structural information on nuclei...

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Detalles Bibliográficos
Autores principales: Yamaoki, Yudai, Nagata, Takashi, Sakamoto, Tomoki, Katahira, Masato
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Biophysical Society of Japan 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7550250/
https://www.ncbi.nlm.nih.gov/pubmed/33110737
http://dx.doi.org/10.2142/biophysico.BSJ-2020006
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author Yamaoki, Yudai
Nagata, Takashi
Sakamoto, Tomoki
Katahira, Masato
author_facet Yamaoki, Yudai
Nagata, Takashi
Sakamoto, Tomoki
Katahira, Masato
author_sort Yamaoki, Yudai
collection PubMed
description The intracellular environment is highly crowded with biomacromolecules such as proteins and nucleic acids. Under such conditions, the structural and biophysical features of nucleic acids have been thought to be different from those in vitro. To obtain high-resolution structural information on nucleic acids in living cells, the in-cell NMR method is a unique tool. Following the first in-cell NMR measurement of nucleic acids in 2009, several interesting insights were obtained using Xenopus laevis oocytes. However, the in-cell NMR spectrum of nucleic acids in living human cells was not reported until two years ago due to the technical challenges of delivering exogenous nucleic acids. We reported the first in-cell NMR spectra of nucleic acids in living human cells in 2018, where we applied a pore-forming toxic protein, streptolysin O. The in-cell NMR measurements demonstrated that the hairpin structures of nucleic acids can be detected in living human cells. In this review article, we summarize our recent work and discuss the future prospects of the in-cell NMR technique for nucleic acids.
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spelling pubmed-75502502020-10-26 Observation of nucleic acids inside living human cells by in-cell NMR spectroscopy Yamaoki, Yudai Nagata, Takashi Sakamoto, Tomoki Katahira, Masato Biophys Physicobiol Review Article The intracellular environment is highly crowded with biomacromolecules such as proteins and nucleic acids. Under such conditions, the structural and biophysical features of nucleic acids have been thought to be different from those in vitro. To obtain high-resolution structural information on nucleic acids in living cells, the in-cell NMR method is a unique tool. Following the first in-cell NMR measurement of nucleic acids in 2009, several interesting insights were obtained using Xenopus laevis oocytes. However, the in-cell NMR spectrum of nucleic acids in living human cells was not reported until two years ago due to the technical challenges of delivering exogenous nucleic acids. We reported the first in-cell NMR spectra of nucleic acids in living human cells in 2018, where we applied a pore-forming toxic protein, streptolysin O. The in-cell NMR measurements demonstrated that the hairpin structures of nucleic acids can be detected in living human cells. In this review article, we summarize our recent work and discuss the future prospects of the in-cell NMR technique for nucleic acids. The Biophysical Society of Japan 2020-05-26 /pmc/articles/PMC7550250/ /pubmed/33110737 http://dx.doi.org/10.2142/biophysico.BSJ-2020006 Text en 2020 THE BIOPHYSICAL SOCIETY OF JAPAN https://creativecommons.org/licenses/by-nc-sa/4.0/This article is licensed under the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 Inter­national License. To view a copy of this license, visit 
https://creativecommons.org/licenses/by-nc-sa/4.0/.
spellingShingle Review Article
Yamaoki, Yudai
Nagata, Takashi
Sakamoto, Tomoki
Katahira, Masato
Observation of nucleic acids inside living human cells by in-cell NMR spectroscopy
title Observation of nucleic acids inside living human cells by in-cell NMR spectroscopy
title_full Observation of nucleic acids inside living human cells by in-cell NMR spectroscopy
title_fullStr Observation of nucleic acids inside living human cells by in-cell NMR spectroscopy
title_full_unstemmed Observation of nucleic acids inside living human cells by in-cell NMR spectroscopy
title_short Observation of nucleic acids inside living human cells by in-cell NMR spectroscopy
title_sort observation of nucleic acids inside living human cells by in-cell nmr spectroscopy
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7550250/
https://www.ncbi.nlm.nih.gov/pubmed/33110737
http://dx.doi.org/10.2142/biophysico.BSJ-2020006
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